RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 EXD3Q8N9H8 876 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 WDYHV1Q96HA8 205 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 RANBP3Q9H6Z4 567 aaPredicted RBP16.49■□□□□ 0.23
CAPN3-209ENST00000466222 TRBV2A0A0J9YWF9 115 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 PRSS37A4D1T9 235 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 IGHG3P01860 377 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 TCRBP04435 133 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 HCCSP53701 268 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 BCL2L15Q5TBC7 163 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 ZIC4Q8N9L1 334 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 Q8NA96 180 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 OR5H6Q8NGV6 325 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 FNDC9Q8TBE3 224 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 BRD7Q9NPI1 651 aa16.49■□□□□ 0.23
CAPN3-209ENST00000466222 SLC22A23A1A5C7 686 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 NPIPA2E9PIF3 369 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 NPIPA3F8WFD2 350 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 AQP8O94778 261 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 GLCEO94923 617 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 ACTL6AO96019 429 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 CLDN17P56750 224 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 RPS11P62280 158 aaKnown RBP eCLIP16.48■□□□□ 0.23
CAPN3-209ENST00000466222 KCTD20Q7Z5Y7 419 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 MEIOBQ8N635 442 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF511Q8NB15 262 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 OR9K2Q8NGE7 335 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 OR13C5Q8NGS8 318 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 OR6K6Q8NGW6 343 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 NAA11Q9BSU3 229 aaPredicted RBP16.48■□□□□ 0.23
CAPN3-209ENST00000466222 GNG8Q9UK08 70 aa16.48■□□□□ 0.23
CAPN3-209ENST00000466222 ALPK2Q86TB3 2170 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 A0A1B0GTH9 108 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF716A6NP11 495 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 SNRPBP14678 240 aaKnown RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 CTLA4P16410 223 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 DAP3P51398 398 aaKnown RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 SLC25A1P53007 311 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 FCN2Q15485 313 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 LINC01590Q5TEZ4 76 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 BTN2A1Q7KYR7 527 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 OR5M9Q8NGP3 310 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 SMIM4Q8WVI0 70 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 KCNK17Q96T54 332 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 PLEKHA1Q9HB21 404 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 NUDT15Q9NV35 164 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 ING1Q9UK53 422 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 LOC102725191A0A1B0GVB3 256 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 SLC16A7O60669 478 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 ANXA3P12429 323 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 NAA10P41227 235 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 LAMTOR1Q6IAA8 161 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 FCRLAQ7L513 359 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 LUZP2Q86TE4 346 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 RFLNBQ8N5W9 214 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF671Q8TAW3 534 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 CPNE4Q96A23 557 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 OR51J1Q9H342 316 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 VSX1Q9NZR4 365 aaPredicted RBP16.47■□□□□ 0.23
CAPN3-209ENST00000466222 CLEC4AQ9UMR7 237 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 MOKQ9UQ07 419 aa16.47■□□□□ 0.23
CAPN3-209ENST00000466222 A0A1B0GVI7 797 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 RENP00797 406 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 FAM205BPQ63HN1 556 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 FGD2Q7Z6J4 655 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 C9orf62Q8N4C0 152 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 CACNG6Q9BXT2 260 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 MRPL13Q9BYD1 178 aaKnown RBP16.46■□□□□ 0.23
CAPN3-209ENST00000466222 ZNF281Q9Y2X9 895 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 HSPB11Q9Y547 144 aa16.46■□□□□ 0.23
CAPN3-209ENST00000466222 NAP1L6A6NFF2 107 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 TVP23AA6NH52 213 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 NPIPB13A6NJU9 1138 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 NPIPB4C9JG80 1138 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 DNPH1O43598 174 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 SULT1B1O43704 296 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 SELENOFO60613 162 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 TPPPO94811 219 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 ECDO95905 644 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 CD3GP09693 182 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 CPN1P15169 458 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 HTR2BP41595 481 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 RPS27P42677 84 aaKnown RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 SRP9P49458 86 aaKnown RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 SELENOPP49908 381 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 DGCR2P98153 550 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 KLF9Q13886 244 aaPredicted RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 ABLIM2Q6H8Q1 611 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 CISD2Q8N5K1 135 aaKnown RBP16.45■□□□□ 0.22
CAPN3-209ENST00000466222 OR56B4Q8NH76 319 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 C15orf40Q8WUR7 153 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 HSD17B8Q92506 261 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 PHF21AQ96BD5 680 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 OR14A2Q96R54 314 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 ALG12Q9BV10 488 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 B9D1Q9UPM9 204 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 A0A1B0GVC2 190 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 A6NIN4 97 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 VAMP5O95183 116 aa16.45■□□□□ 0.22
CAPN3-209ENST00000466222 MPZL1O95297 269 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms