RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 TMEM9BQ9NQ34 198 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 ZNF586Q9NXT0 402 aa2.08□□□□□ -2.08
SMC4-205ENST00000465563 CCDC59Q9P031 241 aaKnown RBP2.08□□□□□ -2.08
SMC4-205ENST00000465563 FCGBPQ9Y6R7 5405 aaPredicted RBP2.07□□□□□ -2.08
SMC4-205ENST00000465563 A0A0U1RQV1 116 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 SMCO2A6NFE2 343 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 NCBP2LA6PVI3 153 aaKnown RBP2.07□□□□□ -2.08
SMC4-205ENST00000465563 HUS1O60921 280 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 FKBP6O75344 327 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 GABARAPO95166 117 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 OXTP01178 125 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 FGF4P08620 206 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 UBTFL6P0CB48 400 aaPredicted RBP2.07□□□□□ -2.08
SMC4-205ENST00000465563 CTRB1P17538 263 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 BCKDHBP21953 392 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 GALP22466 123 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 OR1E1P30953 314 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 SYKP43405 635 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 STXBP1P61764 594 aaKnown RBP2.07□□□□□ -2.08
SMC4-205ENST00000465563 TCP10Q12799 353 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 MERTKQ12866 999 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 ILKQ13418 452 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 ITIH4Q14624 930 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 GINS1Q14691 196 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 STK11Q15831 433 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 THEM4Q5T1C6 240 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 PLET1Q6UQ28 207 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 CCDC148Q8NFR7 591 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 OR5K2Q8NHB8 316 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 C15orf40Q8WUR7 153 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 LZTS2Q9BRK4 669 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 AUNIPQ9H7T9 357 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 SYNDIG1Q9H7V2 258 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 LYARQ9NX58 379 aaKnown RBP2.07□□□□□ -2.08
SMC4-205ENST00000465563 GCNT4Q9P109 453 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 UVRAGQ9P2Y5 699 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 ZNF222Q9UK12 451 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 UBIAD1Q9Y5Z9 338 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 TNS2Q63HR2 1409 aa2.07□□□□□ -2.08
SMC4-205ENST00000465563 SVILO95425 2214 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 BRCA1P38398 1863 aaKnown RBP2.06□□□□□ -2.08
SMC4-205ENST00000465563 KCNE1BA0A087WTH5 132 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 KBTBD11-OT1A0A1B0GTJ5 212 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 SERTM2A0A1B0GWG4 89 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 SOCS1O15524 211 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 FLOT1O75955 427 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 CD160O95971 181 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 MYL2P10916 166 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 SFTPCP11686 197 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 CEACAM3P40198 252 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 ARG2P78540 354 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 SEMG2Q02383 582 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 RCAN2Q14206 197 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 TRAM2Q15035 370 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 GPR107Q5VW38 600 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 MBOAT1Q6ZNC8 495 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 CMC1Q7Z7K0 106 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 LUZP2Q86TE4 346 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 OFCC1Q8IZS5 231 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 GABRG1Q8N1C3 465 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 OR52K2Q8NGK3 314 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 LYPD6BQ8NI32 183 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 ZNF461Q8TAF7 563 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 FAM81AQ8TBF8 368 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 DNAJC1Q96KC8 554 aaKnown RBP2.06□□□□□ -2.08
SMC4-205ENST00000465563 XPO6Q96QU8 1125 aaKnown RBP2.06□□□□□ -2.08
SMC4-205ENST00000465563 BPIFA3Q9BQP9 254 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 C11orf70Q9BRQ4 267 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 RETNQ9HD89 108 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 MRPS30Q9NP92 439 aaKnown RBP2.06□□□□□ -2.08
SMC4-205ENST00000465563 ZNF355PQ9NSJ1 428 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 CLN8Q9UBY8 286 aa2.06□□□□□ -2.08
SMC4-205ENST00000465563 TSSC4Q9Y5U2 329 aaPredicted RBP2.06□□□□□ -2.08
SMC4-205ENST00000465563 A0A1B0GW55 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 A6NDN8 102 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 LSM1O15116 133 aaKnown RBP2.05□□□□□ -2.08
SMC4-205ENST00000465563 RAD51CO43502 376 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 ARG1P05089 322 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 CTSLP07711 333 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 ERCC1P07992 297 aaPredicted RBP2.05□□□□□ -2.08
SMC4-205ENST00000465563 CD3GP09693 182 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DUX4L2P0CJ85 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DUX4L3P0CJ86 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DUX4L5P0CJ88 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DUX4L6P0CJ89 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DUX4L7P0CJ90 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 PSMC3P17980 439 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 TCN2P20062 427 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 GTF2E2P29084 291 aaKnown RBP2.05□□□□□ -2.08
SMC4-205ENST00000465563 RAP1AP62834 184 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 QPRTQ15274 297 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 IRF4Q15306 451 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 AVPI1Q5T686 147 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 TMEM53Q6P2H8 277 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 CENPQQ7L2Z9 268 aaPredicted RBP2.05□□□□□ -2.08
SMC4-205ENST00000465563 OR56A4Q8NGH8 313 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 OR9G4Q8NGQ1 327 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 NEURL3Q96EH8 262 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 PDXPQ96GD0 296 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms