RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 HAVCR1Q96D42 359 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 CMTM3Q96MX0 182 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 RBM24Q9BX46 236 aaKnown RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 OR2B2Q9GZK3 357 aa11.32□□□□□ -0.6
VAPB-203ENST00000463370 ZNF703Q9H7S9 590 aaPredicted RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 MRPL15Q9P015 296 aaKnown RBP11.32□□□□□ -0.6
VAPB-203ENST00000463370 FAM166BA8MTA8 275 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 SLC6A1P30531 599 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 POU3F4P49335 361 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 AIMP2Q13155 320 aaKnown RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 ENDOGQ14249 297 aaKnown RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 C10orf128Q5T292 105 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 RSBN1Q5VWQ0 802 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 FAM166AQ6J272 317 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 KLHL24Q6TFL4 600 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 ZNF704Q6ZNC4 412 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 UTS2BQ765I0 119 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 DTX1Q86Y01 620 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 OR2V1Q8NHB1 315 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 OR51E1Q8TCB6 317 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 SMIM4Q8WVI0 70 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 FGGYQ96C11 551 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 ADAT3Q96EY9 351 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 FAM173AQ9BQD7 235 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 FLVCR1Q9Y5Y0 555 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 CACNG2Q9Y698 323 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 FRYQ5TBA9 3013 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 DCDC2BA2VCK2 349 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 CD2P06729 351 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 UBCP0CG48 685 aaKnown RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 HSD11B1P28845 292 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 MAGEA5P43359 124 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 ZNF133P52736 654 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 NKX2-5P52952 324 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 ART1P52961 327 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 ZNF121P58317 390 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 PITPNAQ00169 270 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 GALK2Q01415 458 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 RSPO4Q2I0M5 234 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 PLA1AQ53H76 456 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 NAA40Q86UY6 237 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 VASH2Q86V25 355 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 SLC25A28Q96A46 364 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 S100A16Q96FQ6 103 aaKnown RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 POU2F3Q9UKI9 436 aa11.31□□□□□ -0.6
VAPB-203ENST00000463370 BOKQ9UMX3 212 aaPredicted RBP11.31□□□□□ -0.6
VAPB-203ENST00000463370 ZFHX2Q9C0A1 2572 aaPredicted RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 A0A1B0GTI1 187 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 SLC17A2O00624 439 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 DHHO43323 396 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 ORC5O43913 435 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 FSTP19883 344 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 CFPP27918 469 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 DCTDP32321 178 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 GDNFP39905 211 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TATDN3Q17R31 274 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 C2orf76Q3KRA6 126 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 GLYATL3Q5SZD4 288 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TMEM244Q5VVB8 128 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 C20orf196Q8IYI0 205 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TOMM5Q8N4H5 51 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 CLEC1AQ8NC01 280 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 PRSS33Q8NF86 280 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 OR8B12Q8NGG6 310 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 UBASH3BQ8TF42 649 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 ABHD3Q8WU67 409 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 SLC7A6Q92536 515 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 FAM3DQ96BQ1 224 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 ULBP2Q9BZM5 246 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 NELFAQ9H3P2 528 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 ZNF275Q9NSD4 429 aaPredicted RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 MYEF2Q9P2K5 600 aaKnown RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 CKLFQ9UBR5 152 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 SLC5A6Q9Y289 635 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 ETV7Q9Y603 341 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 PHF3Q92576 2039 aaKnown RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 OR5H15A6NDH6 313 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 ARGFXA6NJG6 315 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 CTDSPLO15194 276 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 SYT7O43581 403 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 GSTZ1O43708 216 aaPredicted RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 CCNKO75909 580 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 KDM4BO94953 1096 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 MSR1P21757 451 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 CASRP41180 1078 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TAS2R20P59543 309 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 SRYQ05066 204 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 KLF9Q13886 244 aaPredicted RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 TAF13Q15543 124 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 RAB11BQ15907 218 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 RNF144BQ7Z419 303 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 OR1J2Q8NGS2 313 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 OR6F1Q8NGZ6 308 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms