RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CYGBQ8WWM9 190 aa13.17□□□□□ -0.3
SND1-203ENST00000463020 NSMAFQ92636 917 aa13.17□□□□□ -0.3
SND1-203ENST00000463020 HDAC2Q92769 488 aaKnown RBP13.17□□□□□ -0.3
SND1-203ENST00000463020 RDH12Q96NR8 316 aa13.17□□□□□ -0.3
SND1-203ENST00000463020 YTHDF1Q9BYJ9 559 aaKnown RBP13.17□□□□□ -0.3
SND1-203ENST00000463020 PATZ1Q9HBE1 687 aaKnown RBP13.17□□□□□ -0.3
SND1-203ENST00000463020 TMEM106BQ9NUM4 274 aa13.17□□□□□ -0.3
SND1-203ENST00000463020 DCAF13Q9NV06 445 aaKnown RBP13.17□□□□□ -0.3
SND1-203ENST00000463020 ZNF229Q9UJW7 825 aa13.17□□□□□ -0.3
SND1-203ENST00000463020 RPS6KA6Q9UK32 745 aa13.17□□□□□ -0.3
SND1-203ENST00000463020 CLDN34H7C241 214 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 FMO6PO60774 539 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 SERPINA1P01009 418 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 CST1P01037 141 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 MT-ND5P03915 603 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 SCG5P05408 212 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 THRBP10828 461 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 GPX2P18283 190 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 GCH1P30793 250 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 PCGF2P35227 344 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 AQP2P41181 271 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 ALDH3A2P51648 485 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 PPP1CBP62140 327 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 MRPS34P82930 218 aaKnown RBP13.16□□□□□ -0.3
SND1-203ENST00000463020 TNFAIP6P98066 277 aaPredicted RBP13.16□□□□□ -0.3
SND1-203ENST00000463020 RELBQ01201 579 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 PAX8Q06710 450 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 PSG7Q13046 419 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 APOFQ13790 326 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 SLC36A3Q495N2 470 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 NRN1LQ496H8 165 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 ARMC4Q5T2S8 1044 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 NANOGNBQ7Z5D8 188 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 DPPA2Q7Z7J5 298 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 WFDC12Q8WWY7 111 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 SLC25A28Q96A46 364 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 TMIGD2Q96BF3 282 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 PYURFQ96I23 114 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 ZNF607Q96SK3 696 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 SLITRK2Q9H156 845 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 ZMAT3Q9HA38 289 aaKnown RBP13.16□□□□□ -0.3
SND1-203ENST00000463020 SIAEQ9HAT2 523 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 C20orf141Q9NUB4 165 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 BAG5Q9UL15 447 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 GMEB1Q9Y692 573 aa13.16□□□□□ -0.3
SND1-203ENST00000463020 A0A087WXM4 84 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 POM121CA8CG34 1229 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 A8MXK9 166 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 G3V2T6 193 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 ZNF205O95201 554 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 PTHP01270 115 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 MT-ND1P03886 318 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 ATP6V1B1P15313 513 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 ZNF84P51523 738 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 GK3PQ14409 553 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 SGCAQ16586 387 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 MOGQ16653 247 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 VMACQ2NL98 169 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 FOXB2Q5VYV0 432 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 ZNF774Q6NX45 483 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 SPATC1Q76KD6 591 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 RHOUQ7L0Q8 258 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 LRRC28Q86X40 367 aaPredicted RBP13.15□□□□□ -0.3
SND1-203ENST00000463020 NKAIN4Q8IVV8 208 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 PARP8Q8N3A8 854 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 ZNF283Q8N7M2 679 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 OR5K1Q8NHB7 308 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 DACT3Q96B18 629 aaPredicted RBP13.15□□□□□ -0.3
SND1-203ENST00000463020 TAMM41Q96BW9 452 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 DGCR14Q96DF8 476 aaKnown RBP13.15□□□□□ -0.3
SND1-203ENST00000463020 GPA33Q99795 319 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 OR2H1Q9GZK4 316 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 EGLN1Q9GZT9 426 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 CCNB1IP1Q9NPC3 277 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 TNFRSF19Q9NS68 423 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 SLC13A4Q9UKG4 626 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 ORC6Q9Y5N6 252 aa13.15□□□□□ -0.3
SND1-203ENST00000463020 M0QX08 132 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 HOXA3O43365 443 aaPredicted RBP13.14□□□□□ -0.31
SND1-203ENST00000463020 AHCYL1O43865 530 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 SERPINB7O75635 380 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 PLATP00750 562 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 TNFRSF1BP20333 461 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 FUT4P22083 530 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 GDI2P50395 445 aaKnown RBP13.14□□□□□ -0.31
SND1-203ENST00000463020 BTG1P62324 171 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 CDK5R2Q13319 367 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 CNPY1Q3B7I2 92 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 TTC23Q5W5X9 447 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 SLC25A47Q6Q0C1 308 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 PATL1Q86TB9 770 aaKnown RBP13.14□□□□□ -0.31
SND1-203ENST00000463020 SATL1Q86VE3 508 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 OR52E2Q8NGJ4 325 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 TMEM255BQ8WV15 326 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 ITLN1Q8WWA0 313 aa13.14□□□□□ -0.31
SND1-203ENST00000463020 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
SND1-203ENST00000463020 OSBPL10Q9BXB5 764 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms