RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 PHYHO14832 338 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 SYNGR3O43761 229 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 RPP14O95059 124 aaKnown RBP11.74□□□□□ -0.53
PBRM1-219ENST00000462207 LALBAP00709 142 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 ANOS1P23352 680 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 APEX1P27695 318 aaKnown RBP11.74□□□□□ -0.53
PBRM1-219ENST00000462207 PSMB10P40306 273 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 HTR5AP47898 357 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 ROM1Q03395 351 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 EGR3Q06889 387 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 TFF3Q07654 80 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 TAB1Q15750 504 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 RNLSQ5VYX0 342 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 TMEM53Q6P2H8 277 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 KRT77Q7Z794 578 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 SYT9Q86SS6 491 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 ZNF808Q8N4W9 903 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-219ENST00000462207 YIPF7Q8N8F6 280 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 STEAP2Q8NFT2 490 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 RNASE6Q93091 150 aaKnown RBP11.74□□□□□ -0.53
PBRM1-219ENST00000462207 ZNF75AQ96N20 296 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 ATF6BQ99941 703 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 MND1Q9BWT6 205 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 KCNJ16Q9NPI9 418 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 CAB39Q9Y376 341 aaPredicted RBP11.74□□□□□ -0.53
PBRM1-219ENST00000462207 SLC25A15Q9Y619 301 aa11.74□□□□□ -0.53
PBRM1-219ENST00000462207 OR6C6A6NF89 314 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 METTL15A6NJ78 407 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 MRPS14O60783 128 aaKnown RBP11.73□□□□□ -0.53
PBRM1-219ENST00000462207 CLDN14O95500 239 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 KRT8P05787 483 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 HNRNPCP07910 306 aaKnown RBP eCLIP11.73□□□□□ -0.53
PBRM1-219ENST00000462207 H2BFMP0C1H6 154 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 CCL2P13500 99 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 PLA2G2AP14555 144 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 ALDH3B2P48448 385 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 WNT4P56705 351 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 ACTA2P62736 377 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 ACTG2P63267 376 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 HGFACQ04756 655 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 SRSF1Q07955 248 aaKnown RBP eCLIP11.73□□□□□ -0.53
PBRM1-219ENST00000462207 MED22Q15528 200 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 TIMM23BQ5SRD1 257 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 KCTD18Q6PI47 426 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-219ENST00000462207 SEZ6L2Q6UXD5 910 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 KLBQ86Z14 1044 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 ZNF679Q8IYX0 411 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 SVOPQ8N4V2 548 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 ZFP41Q8N8Y5 198 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 OR52N1Q8NH53 320 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 OR1F12Q8NHA8 337 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 HSD17B8Q92506 261 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
PBRM1-219ENST00000462207 PELI1Q96FA3 418 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 HDHD5Q9BXW7 423 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 HDHD2Q9H0R4 259 aa11.73□□□□□ -0.53
PBRM1-219ENST00000462207 DDX28Q9NUL7 540 aaKnown RBP11.73□□□□□ -0.53
PBRM1-219ENST00000462207 INMTO95050 263 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 ARR3P36575 388 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 PRKXP51817 358 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 GALK2Q01415 458 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 MFGE8Q08431 387 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 TAF13Q15543 124 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 RSPO1Q2MKA7 263 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 LIPNQ5VXI9 398 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 XKRXQ6PP77 449 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 SYS1Q8N2H4 156 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 ZC3HAV1LQ96H79 300 aaKnown RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 NPDC1Q9NQX5 325 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 NPAP1Q9NZP6 1156 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 AMDHD2Q9Y303 409 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 LOC100509620A0A075B734 347 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 PNMA8CA0A1B0GUJ8 204 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 MT-ND5P03915 603 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 THBDP07204 575 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 HSMCR30P0CW71 290 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 HOXB1P14653 301 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 ZNF14P17017 642 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 AGAP20933 346 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 CRYGSP22914 178 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 ZNF83P51522 516 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 RIDAP52758 137 aaKnown RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 PPA1Q15181 289 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 SPHARQ15513 63 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 TMPRSS11AQ6ZMR5 421 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 FAM220AQ7Z4H9 259 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 DPPA2Q7Z7J5 298 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 CCDC36Q8IYA8 594 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 WACQ9BTA9 647 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 MROQ9BYG7 248 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 FAIMQ9NVQ4 179 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 SIRT4Q9Y6E7 314 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-219ENST00000462207 CACNA1CQ13936 2221 aa11.72□□□□□ -0.53
PBRM1-219ENST00000462207 C5orf63A6NC05 138 aa11.71□□□□□ -0.53
PBRM1-219ENST00000462207 F5H5K5 113 aa11.71□□□□□ -0.53
PBRM1-219ENST00000462207 SULT1C4O75897 302 aa11.71□□□□□ -0.53
PBRM1-219ENST00000462207 PNPP00491 289 aa11.71□□□□□ -0.53
PBRM1-219ENST00000462207 SLC2A1P11166 492 aa11.71□□□□□ -0.53
PBRM1-219ENST00000462207 HSD11B1P28845 292 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms