RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 IGHV2-70P01814 119 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 OPN1LWP04000 364 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 FCER2P06734 321 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 DBIP07108 87 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 CHRM4P08173 479 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 IFI30P13284 250 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 IL7RP16871 459 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PTBP1P26599 531 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 AQP1P29972 269 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TIMP3P35625 211 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PTGDSP41222 190 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 MAGEA5P43359 124 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 KIR2DL2P43627 348 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF136P52737 540 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 FOXO1Q12778 655 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 SCARB2Q14108 478 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 HNF4GQ14541 408 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 LARS2Q15031 903 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF141Q15928 474 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TIGD6Q17RP2 521 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF404Q494X3 552 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 FAM98BQ52LJ0 330 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 KLHL26Q53HC5 615 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PABPC1L2AQ5JQF8 200 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 DNLZQ5SXM8 178 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PRAMEF8Q5VWM4 474 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PRAMEF7Q5VXH5 474 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 GPR139Q6DWJ6 353 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 REEP3Q6NUK4 255 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TEX261Q6UWH6 196 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 APOOLQ6UXV4 268 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 FRRS1Q6ZNA5 592 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 P2RY8Q86VZ1 359 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 IFNEQ86WN2 208 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 MISPQ8IVT2 679 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC30A8Q8IWU4 369 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 C10orf111Q8N326 155 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TMEM251Q8N6I4 163 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 WDSUB1Q8N9V3 476 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 OR2T12Q8NG77 320 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 OR4M2Q8NGB6 313 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 OR52P1PQ8NH57 321 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 BBS10Q8TAM1 723 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TMEM171Q8WVE6 324 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 OIT3Q8WWZ8 545 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 IGFBPL1Q8WX77 278 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 FCGR1BQ92637 280 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 OTULINQ96BN8 352 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 LGALS12Q96DT0 336 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PIK3IP1Q96FE7 263 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 KLHL15Q96M94 604 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 NSMCE2Q96MF7 247 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 GNRHR2Q96P88 292 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF607Q96SK3 696 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 SSX3Q99909 188 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 RBM24Q9BX46 236 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 RTN4RQ9BZR6 473 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC38A1Q9H2H9 487 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TMEM38AQ9H6F2 299 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF703Q9H7S9 590 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PTGES2Q9H7Z7 377 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 BCL2L10Q9HD36 194 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 CHMP1AQ9HD42 196 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 CCNB1IP1Q9NPC3 277 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 GLRX2Q9NS18 164 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PLCXD1Q9NUJ7 323 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 NUDT15Q9NV35 164 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 TMEM160Q9NX00 188 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 VSX1Q9NZR4 365 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 NDUFAF4Q9P032 175 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 JKAMPQ9P055 326 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 MED11Q9P086 117 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 GRHPRQ9UBQ7 328 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 LPAR3Q9UBY5 353 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 PURGQ9UJV8 347 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 DKKL1Q9UK85 242 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 ING4Q9UNL4 249 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 U3KQ87 197 aa5.3□□□□□ -1.56
SMARCC1-204ENST00000462198 MALRD1Q5VYJ5 2156 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 TRGV5A0A0B4J1U4 118 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 CENPVL1A0A0U1RR11 272 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 C17orf51A8MQB3 221 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 DEFB108AA8MXU0 73 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 AHRRA9YTQ3 701 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 FAM220BPB1ANY3 271 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 KDM4EB2RXH2 506 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF264O43296 627 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 SEC14L5O43304 696 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 TPST1O60507 370 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 GLSO94925 669 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 RAB3DO95716 219 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 CSTAP01040 98 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 F13BP05160 661 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 RFPL3SP0C7P2 107 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 ADORA3P0DMS8 318 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 SRD5A1P18405 259 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 CTSSP25774 331 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 DPP4P27487 766 aa5.29□□□□□ -1.56
SMARCC1-204ENST00000462198 PCGF2P35227 344 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms