RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 MED4Q9NPJ6 270 aa11.18□□□□□ -0.62
UBA3-205ENST00000461934 VSX1Q9NZR4 365 aaPredicted RBP11.18□□□□□ -0.62
UBA3-205ENST00000461934 OR5V1Q9UGF6 321 aa11.18□□□□□ -0.62
UBA3-205ENST00000461934 ATPIF1Q9UII2 106 aa11.18□□□□□ -0.62
UBA3-205ENST00000461934 AUP1Q9Y679 476 aa11.18□□□□□ -0.62
UBA3-205ENST00000461934 V9GYQ6 96 aa11.18□□□□□ -0.62
UBA3-205ENST00000461934 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 RER1O15258 196 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 GADD45GO95257 159 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 PPP1R3DO95685 299 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 HLA-DQA2P01906 255 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 SLC6A6P31641 620 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 MDH2P40926 338 aaKnown RBP11.17□□□□□ -0.62
UBA3-205ENST00000461934 OMPP47874 163 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 SRP9P49458 86 aaKnown RBP11.17□□□□□ -0.62
UBA3-205ENST00000461934 SPIBQ01892 262 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 SPRNQ5BIV9 151 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 OTPQ5XKR4 325 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 C8orf82Q6P1X6 216 aaPredicted RBP11.17□□□□□ -0.62
UBA3-205ENST00000461934 LEG1Q6P5S2 330 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 OR2AJ1Q8NGZ0 328 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 OR13G1Q8NGZ3 307 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 HCAR1Q9BXC0 346 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
UBA3-205ENST00000461934 HDHD2Q9H0R4 259 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 NDUFAF4Q9P032 175 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 ABCD2Q9UBJ2 740 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 PPIAL4AQ9Y536 164 aa11.17□□□□□ -0.62
UBA3-205ENST00000461934 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 LRRC30A6NM36 301 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 PTP4A3O75365 173 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 DIRAS1O95057 198 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 DBHP09172 617 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 IRF2P14316 349 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 SELEP16581 610 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 ZNF26P17031 533 aaPredicted RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 IFNGR2P38484 337 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 HLXQ14774 488 aaPredicted RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 SLC36A3Q495N2 470 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 CCDC92Q53HC0 331 aaPredicted RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 OR2T2Q6IF00 324 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 Q6ZR03 302 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 LRRC28Q86X40 367 aaPredicted RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 C1orf87Q8N0U7 546 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 OR8G5Q8NG78 346 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 PLEKHA8Q96JA3 519 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 GPA33Q99795 319 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 COQ7Q99807 217 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 ELAC2Q9BQ52 826 aaKnown RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 IFT27Q9BW83 186 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 FAM107BQ9H098 131 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 SRA1Q9HD15 236 aaKnown RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 DCAF13Q9NV06 445 aaKnown RBP11.16□□□□□ -0.62
UBA3-205ENST00000461934 DCAF16Q9NXF7 216 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 TMCC3Q9ULS5 477 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 LRCH1Q9Y2L9 728 aa11.16□□□□□ -0.62
UBA3-205ENST00000461934 TRBV4-1A0A0J9YWV2 114 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 OR10H3O60404 316 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 ZFP36P26651 326 aaKnown RBP11.15□□□□□ -0.62
UBA3-205ENST00000461934 PRDX6P30041 224 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 CDKN2AP42771 156 aaKnown RBP11.15□□□□□ -0.62
UBA3-205ENST00000461934 COMPP49747 757 aaPredicted RBP11.15□□□□□ -0.62
UBA3-205ENST00000461934 RAD23AP54725 363 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 GNB2P62879 340 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 MALLQ13021 153 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 ZNF154Q13106 437 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 KCNMB1Q16558 191 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 MEP1BQ16820 701 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 BTNL3Q6UXE8 466 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 FBXW12Q6X9E4 464 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 RNF148Q8N7C7 305 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 BHLHE23Q8NDY6 225 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 ZNF420Q8TAQ5 688 aaPredicted RBP11.15□□□□□ -0.62
UBA3-205ENST00000461934 PITX2Q99697 317 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 PLA2G12AQ9BZM1 189 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 MS4A7Q9GZW8 240 aaPredicted RBP11.15□□□□□ -0.62
UBA3-205ENST00000461934 OR52D1Q9H346 318 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 GCM1Q9NP62 436 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 TMEM100Q9NV29 134 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 MAGEL2Q9UJ55 1249 aa11.15□□□□□ -0.62
UBA3-205ENST00000461934 TMEM178BH3BS89 294 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 IMPA2O14732 288 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 GPANK1O95872 356 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 TXNDC12O95881 172 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 FABP3P05413 133 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 FPR3P25089 353 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 SLC6A9P48067 706 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 ERFP50548 548 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 MMP16P51512 607 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 ZMYND11Q15326 602 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 SEC23BQ15437 767 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 CORO6Q6QEF8 472 aa11.14□□□□□ -0.63
UBA3-205ENST00000461934 NLRC3Q7RTR2 1065 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms