RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 NUAK2Q9H093 628 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 HDHD2Q9H0R4 259 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 MSL2Q9HCI7 577 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 NRIP3Q9NQ35 241 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 PURGQ9UJV8 347 aaKnown RBP7.55□□□□□ -1.2
LDB1-203ENST00000461873 PPP1R3CQ9UQK1 317 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 SIGLEC7Q9Y286 467 aa7.55□□□□□ -1.2
LDB1-203ENST00000461873 A0A0A6YYJ9 748 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 TRBV4-1A0A0J9YWV2 114 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 FAM157AC9JC47 383 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 J3QLI3 93 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 IDH3BO43837 385 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 PTP4A3O75365 173 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 RP2O75695 350 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 NGFP01138 241 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 HSD17B1P14061 328 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 OMPP47874 163 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 SLC6A9P48067 706 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 MMP15P51511 669 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 ACTG1P63261 375 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 ECH1Q13011 328 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 PSG7Q13046 419 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 ENDOGQ14249 297 aaKnown RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 RFX4Q33E94 735 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 DNAL1Q4LDG9 190 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 C8orf82Q6P1X6 216 aaPredicted RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 C12orf54Q6X4T0 127 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 VASH1Q7L8A9 365 aaPredicted RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 FAM122BQ7Z309 247 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 C1orf87Q8N0U7 546 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 OR5AS1Q8N127 324 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 MUC20Q8N307 709 aaPredicted RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 OR13G1Q8NGZ3 307 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 SPTSSAQ969W0 71 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 C1orf159Q96HA4 380 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 GPX7Q96SL4 187 aaPredicted RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 MRI1Q9BV20 369 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 C1orf21Q9H246 121 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 OR52D1Q9H346 318 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 C7orf69Q9H7B7 122 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 RPRD1BQ9NQG5 326 aaKnown RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 PTTG3PQ9NZH4 202 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 VSX1Q9NZR4 365 aaPredicted RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 IL19Q9UHD0 177 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 ATPIF1Q9UII2 106 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 NOP16Q9Y3C1 178 aaKnown RBP7.54□□□□□ -1.2
LDB1-203ENST00000461873 NPTNQ9Y639 398 aa7.54□□□□□ -1.2
LDB1-203ENST00000461873 DNHD1Q96M86 4753 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 F5H5K5 113 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TNFRSF11BO00300 401 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 GNGT2O14610 69 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 ARPC2O15144 300 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 RER1O15258 196 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 PLPP2O43688 288 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 ICMTO60725 284 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 CCNB2O95067 398 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 PRSS23O95084 383 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 LCATP04180 440 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 CD55P08174 381 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 RAC2P15153 192 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 FPR3P25089 353 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TPTEP56180 551 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 LCN2P80188 198 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 MS4A2Q01362 244 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 KRTAP24-1Q3LI83 254 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 FAM98BQ52LJ0 330 aaKnown RBP7.53□□□□□ -1.2
LDB1-203ENST00000461873 ESCO2Q56NI9 601 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 ARMCX4Q5H9R4 360 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 BTNL3Q6UXE8 466 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 PROKR2Q8NFJ6 384 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 OR52E2Q8NGJ4 325 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 OR11L1Q8NGX0 322 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 OR2T4Q8NH00 348 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 OR4K13Q8NH42 304 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 SPRYD4Q8WW59 207 aaPredicted RBP7.53□□□□□ -1.2
LDB1-203ENST00000461873 GTF3AQ92664 365 aaKnown RBP7.53□□□□□ -1.2
LDB1-203ENST00000461873 CCDC124Q96CT7 223 aaKnown RBP7.53□□□□□ -1.2
LDB1-203ENST00000461873 HAVCR1Q96D42 359 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 PLEKHA8Q96JA3 519 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 RAB3IPQ96QF0 476 aaPredicted RBP7.53□□□□□ -1.2
LDB1-203ENST00000461873 NMNAT3Q96T66 252 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 COQ7Q99807 217 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 SUCNR1Q9BXA5 334 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TEX12Q9BXU0 123 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TRIM15Q9C019 465 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 REEP1Q9H902 201 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 IL1RAPQ9NPH3 570 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TMEM106BQ9NUM4 274 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TBC1D23Q9NUY8 699 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 TMEM100Q9NV29 134 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 OR5V1Q9UGF6 321 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 B9D1Q9UPM9 204 aa7.53□□□□□ -1.2
LDB1-203ENST00000461873 CUBNO60494 3623 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 DYSFO75923 2080 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 ZSCAN5BA6NJL1 495 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 H0YHG0 523 aa7.52□□□□□ -1.21
LDB1-203ENST00000461873 WNT9BO14905 357 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms