RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 LINC01560Q8TB33 94 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ACTRT1Q8TDG2 376 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 PCNPQ8WW12 178 aaKnown RBP3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 SELENOMQ8WWX9 145 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 NRGNQ92686 78 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ESAMQ96AP7 390 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 WDR34Q96EX3 536 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ANKRD27Q96NW4 1050 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 GPA33Q99795 319 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 COQ7Q99807 217 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 MAPKAP1Q9BPZ7 522 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ZNF416Q9BWM5 594 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ANGPTL4Q9BY76 406 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ACPTQ9BZG2 426 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 NMNAT2Q9BZQ4 307 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 SPNS1Q9H2V7 528 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 LIME1Q9H400 295 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ZNF665Q9H7R5 613 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 PLEKHF2Q9H8W4 249 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ACTR8Q9H981 624 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 MARCH7Q9H992 704 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 PLEKHA3Q9HB20 300 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 NMRAL1Q9HBL8 299 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 SDHAF3Q9NRP4 125 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 SPRR3Q9UBC9 169 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 OPTCQ9UBM4 332 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 ZNF490Q9ULM2 529 aaPredicted RBP3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 MGAT4BQ9UQ53 548 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 CHMP2BQ9UQN3 213 aa3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 MRPS7Q9Y2R9 242 aaKnown RBP3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 CHCHD2Q9Y6H1 151 aaPredicted RBP3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 SETD2Q9BYW2 2564 aaPredicted RBP3.47□□□□□ -1.85
PRPF4B-202ENST00000461612 MED13Q9UHV7 2174 aa3.46□□□□□ -1.85
PRPF4B-202ENST00000461612 PDZD2O15018 2839 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 TNRC6AQ8NDV7 1962 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 A0A0G2JN53 185 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 FAM230AA0A1W2PPH8 454 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PINLYPA6NC86 204 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 GOLGA6L10A6NI86 522 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SRRM4A7MD48 611 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 FOXE1O00358 373 aaPredicted RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CHEK1O14757 476 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 EIF3HO15372 352 aaKnown RBP eCLIP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 ZSCAN12O43309 604 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 TSC22D2O75157 780 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 MFN2O95140 757 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 ETHE1O95571 254 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 LYNP07948 512 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CCDC166P0CW27 439 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 TCP1P17987 556 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CRABP2P29373 138 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 ELK3P41970 407 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SLC1A6P48664 564 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PITPNBP48739 271 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CDK9P50750 372 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 ZNF136P52737 540 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 FUT7Q11130 342 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 COX10Q12887 443 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 GK2Q14410 553 aaPredicted RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 TSNQ15631 228 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 FAM83EQ2M2I3 478 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PRAMEF20Q5VT98 475 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 TIGD3Q6B0B8 471 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 OR52E8Q6IFG1 317 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 C16orf47Q6ZP98 133 aaPredicted RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SSX8Q7RTT4 187 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 LRRC70Q7Z2Q7 622 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 P4HA3Q7Z4N8 544 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 LUZP2Q86TE4 346 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SLC25A42Q86VD7 318 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 MISPQ8IVT2 679 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 C9orf40Q8IXQ3 194 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 FGFRL1Q8N441 504 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 WFDC11Q8NEX6 87 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 OR10G3Q8NGC4 313 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 OR4K14Q8NGD5 310 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 GPR148Q8TDV2 347 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PYROXD1Q8WU10 500 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PPWD1Q96BP3 646 aaKnown RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CAPZA3Q96KX2 299 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 RILPQ96NA2 401 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 TNFRSF13CQ96RJ3 184 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SERPINI1Q99574 410 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CCL19Q99731 98 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 ERP44Q9BS26 406 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 DCTN5Q9BTE1 182 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 MED18Q9BUE0 208 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 MS4A8Q9BY19 250 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 UGT2B28Q9BY64 529 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SHCBP1LQ9BZQ2 653 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 RHOJQ9H4E5 214 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 DCLRE1BQ9H816 532 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 METTL7AQ9H8H3 244 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 CXorf21Q9HAI6 301 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 SH2D2AQ9NP31 389 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 ACOXLQ9NUZ1 547 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PAQR5Q9NXK6 330 aaPredicted RBP3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 PLEK2Q9NYT0 353 aa3.46□□□□□ -1.86
PRPF4B-202ENST00000461612 RNF14Q9UBS8 474 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms