RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 MFSD1Q9H3U5 465 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 DSN1Q9H410 356 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 PANK3Q9H999 370 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 ISYNA1Q9NPH2 558 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 XPNPEP1Q9NQW7 623 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 SPANXB1Q9NS25 103 aaPredicted RBP2.69□□□□□ -1.98
VPS8-215ENST00000460158 PARVAQ9NVD7 372 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 CMTM6Q9NX76 183 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 GALPQ9UBC7 116 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 LSM7Q9UK45 103 aaKnown RBP2.69□□□□□ -1.98
VPS8-215ENST00000460158 SCML2Q9UQR0 700 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 ERGIC3Q9Y282 383 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 RCL1Q9Y2P8 373 aaKnown RBP2.69□□□□□ -1.98
VPS8-215ENST00000460158 KCNIP3Q9Y2W7 256 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 ZNF337Q9Y3M9 751 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 ARL5AQ9Y689 179 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 USH1CQ9Y6N9 552 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 PLEKHH1Q9ULM0 1364 aa2.69□□□□□ -1.98
VPS8-215ENST00000460158 BRCA1P38398 1863 aaKnown RBP2.69□□□□□ -1.98
VPS8-215ENST00000460158 TRAV8-7A0A075B6U6 113 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 TRBV5-4A0A0C4DH59 114 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 SLC5A10A0PJK1 596 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 ANKRD20A5PA0PJZ0 165 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 OR5H15A6NDH6 313 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 K7EQG2 157 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 K7ERI5 159 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 CCRL2O00421 344 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 SLC9A3R1O14745 358 aaPredicted RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 STX10O60499 249 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 SHOX2O60902 331 aaPredicted RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 TRAPPC6AO75865 159 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 C1orf105O95561 183 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 KRT75O95678 551 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RAB36O95755 333 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 LSM8O95777 96 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 CLIC3O95833 236 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 TIMP1P01033 207 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 IGHV3-13P01766 116 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 HLA-AP01891 365 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 CDK1P06493 297 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 THRAP10827 490 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 CBR1P16152 277 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 HIST1H1CP16403 213 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 CELP19835 753 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 ATP6V1B2P21281 511 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 VHLP40337 213 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 XCR1P46094 333 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 CYB561P49447 251 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 PEX3P56589 373 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RPS27AP62979 156 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 SRPXP78539 464 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 PRKCDQ05655 676 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RAB40BQ12829 278 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 MLLT11Q13015 90 aaPredicted RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 DYNC1I2Q13409 638 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 ASAH1Q13510 395 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RAB31Q13636 194 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 GNMTQ14749 295 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 GPNMBQ14956 572 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 PSMD5Q16401 504 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 DGUOKQ16854 277 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 VWA2Q5GFL6 755 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 TIMM23BQ5SRD1 257 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 HES5Q5TA89 166 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 MEDAGQ5VYS4 303 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 TRIQKQ629K1 86 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 FAM45BPQ6NSW5 357 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 NIPAL1Q6NVV3 410 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 ATRAIDQ6UW56 229 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 FAM131AQ6UXB0 335 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 SLC25A48Q6ZT89 311 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 TMED4Q7Z7H5 227 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 S100A7AQ86SG5 101 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RALGPS2Q86X27 583 aaPredicted RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 TMEM25Q86YD3 366 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 LINC01561Q8N1V8 128 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 STPG2Q8N412 459 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 EID2Q8N6I1 236 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 GVQW1Q8N7I0 195 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 PXT1Q8NFP0 134 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 VN1R2Q8NFZ6 395 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 OR1S2Q8NGQ3 325 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 OR10Z1Q8NGY1 313 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 OR6F1Q8NGZ6 308 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 OR51F2Q8NH61 342 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 FAM45AQ8TCE6 357 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RASSF5Q8WWW0 418 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 LZICQ8WZA0 190 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 UFD1Q92890 307 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 NABP1Q96AH0 204 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 FLYWCH2Q96CP2 140 aaKnown RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 WDR34Q96EX3 536 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 RMND5BQ96G75 393 aaPredicted RBP2.68□□□□□ -1.98
VPS8-215ENST00000460158 Q96MT0 163 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 PRAP1Q96NZ9 151 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 PHB2Q99623 299 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 ATF6BQ99941 703 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 SLC35A5Q9BS91 424 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 NUDT9Q9BW91 350 aa2.68□□□□□ -1.98
VPS8-215ENST00000460158 FAIM2Q9BWQ8 316 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms