RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 CLPTM1O96005 669 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 ECH1Q13011 328 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 TRIP10Q15642 601 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 LPCAT4Q643R3 524 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 RGS7BPQ6MZT1 257 aaPredicted RBP12.62□□□□□ -0.39
CLCN1-203ENST00000455478 MEPCEQ7L2J0 689 aaKnown RBP12.62□□□□□ -0.39
CLCN1-203ENST00000455478 DPY19L4Q7Z388 723 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 OR6N2Q8NGY6 317 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 ABHD4Q8TB40 342 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 UBE2FQ969M7 185 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 TRMT61AQ96FX7 289 aaKnown RBP12.62□□□□□ -0.39
CLCN1-203ENST00000455478 MARS2Q96GW9 593 aaKnown RBP12.62□□□□□ -0.39
CLCN1-203ENST00000455478 HRASLS5Q96KN8 279 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 DCLRE1CQ96SD1 692 aaKnown RBP12.62□□□□□ -0.39
CLCN1-203ENST00000455478 ATF6BQ99941 703 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 SYT3Q9BQG1 590 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 ELOVL3Q9HB03 270 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 TBCCD1Q9NVR7 557 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 MYEF2Q9P2K5 600 aaKnown RBP12.62□□□□□ -0.39
CLCN1-203ENST00000455478 STARD10Q9Y365 291 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
CLCN1-203ENST00000455478 IGLV3-9A0A075B6K5 115 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SELENOFO60613 162 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 ABHD16AO95870 558 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 IGHV4-39P01824 125 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 BMP4P12644 408 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 ATP5J2P56134 94 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 RPS7P62081 194 aaKnown RBP12.61□□□□□ -0.39
CLCN1-203ENST00000455478 PPP1CBP62140 327 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SNRPD2P62316 118 aaKnown RBP12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SPATA46Q5T0L3 261 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 NXNL2Q5VZ03 156 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 ARL9Q6T311 187 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 UNQ6126/PRO20091Q6UXV3 157 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SHFQ7M4L6 423 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 C1orf174Q8IYL3 243 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SYNPRQ8TBG9 265 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SLC25A40Q8TBP6 338 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 SLAMF6Q96DU3 332 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 AMELYQ99218 206 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 ABHD6Q9BV23 337 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 OR2J1Q9GZK6 312 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 POFUT1Q9H488 388 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 DCLRE1BQ9H816 532 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
CLCN1-203ENST00000455478 DUSP13Q9UII6 198 aa12.61□□□□□ -0.39
CLCN1-203ENST00000455478 ACSM4P0C7M7 580 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 MPV17P39210 176 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 NAA10P41227 235 aaPredicted RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 HCCSP53701 268 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 EIF2B1Q14232 305 aaKnown RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 LRRC36Q1X8D7 754 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 ZNF718Q3SXZ3 478 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 TMEM255AQ5JRV8 349 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 SPNS3Q6ZMD2 512 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 COLCA1Q6ZS62 124 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 NAA40Q86UY6 237 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 ZCCHC24Q8N2G6 241 aaKnown RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 GALNT4Q8N4A0 578 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 OR8J1Q8NGP2 316 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 OTOSQ8NHW6 89 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 FAM81AQ8TBF8 368 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 KLF14Q8TD94 323 aaPredicted RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 TRUB1Q8WWH5 349 aaKnown RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 CENPMQ9NSP4 180 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 FAM118AQ9NWS6 357 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 H2AFY2Q9P0M6 372 aaPredicted RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 NKX1-2Q9UD57 310 aaPredicted RBP12.6□□□□□ -0.39
CLCN1-203ENST00000455478 ACANP16112 2415 aa12.6□□□□□ -0.39
CLCN1-203ENST00000455478 VPS13CQ709C8 3753 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 FLNAP21333 2647 aaKnown RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 F5H5K5 113 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 CASQ2O14958 399 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 IGHV3-13P01766 116 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 ADRA2AP08913 450 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 TUBG1P23258 451 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 PEX2P28328 305 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 OTX1P32242 354 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 RGS6P49758 472 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 PPOXP50336 477 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 KLF3P57682 345 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 CDC42P60953 191 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 GGTLC2Q14390 218 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 MAD2L1BPQ15013 274 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 Q5PR19 223 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 LCN1P1Q5VSP4 162 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 SHEQ5VZ18 495 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 MBNL2Q5VZF2 373 aaKnown RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 PRSS57Q6UWY2 283 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 SPATC1Q76KD6 591 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 SLC16A9Q7RTY1 509 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 WFDC11Q8NEX6 87 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 RNF133Q8WVZ7 376 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 IPCEF1Q8WWN9 437 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 ZNF582Q96NG8 517 aaPredicted RBP12.59□□□□□ -0.39
CLCN1-203ENST00000455478 C1QTNF5Q9BXJ0 243 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 YIPF3Q9GZM5 350 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 TUBG2Q9NRH3 451 aa12.59□□□□□ -0.39
CLCN1-203ENST00000455478 FBXO9Q9UK97 447 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms