RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TOR3AQ9H497 397 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 GRIP1Q9Y3R0 1128 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 PMF1-BGLAPU3KQ54 211 aa24.05■■□□□ 1.44
SMARCC1-203ENST00000454240 H7C417 338 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 ABHD16AO95870 558 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 RPS7P62081 194 aaKnown RBP24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 SNRPD2P62316 118 aaKnown RBP24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 SHFQ7M4L6 423 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 DPY19L4Q7Z388 723 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 BCDIN3DQ7Z5W3 292 aaKnown RBP24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 LRP11Q86VZ4 500 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 ABHD4Q8TB40 342 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 ST7LQ8TDW4 575 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 DCLRE1BQ9H816 532 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 DDX28Q9NUL7 540 aaKnown RBP24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 FZR1Q9UM11 496 aa24.04■■□□□ 1.44
SMARCC1-203ENST00000454240 CDC42P60953 191 aa24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 TRIP10Q15642 601 aa24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 MEPCEQ7L2J0 689 aaKnown RBP24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 KRTAP1-3Q8IUG1 177 aa24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 OR8J1Q8NGP2 316 aa24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 IPCEF1Q8WWN9 437 aaPredicted RBP24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 MARS2Q96GW9 593 aaKnown RBP24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 FBXO9Q9UK97 447 aaPredicted RBP24.03■■□□□ 1.44
SMARCC1-203ENST00000454240 IGLV3-9A0A075B6K5 115 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 SELENOFO60613 162 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 ATP5J2P56134 94 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 PPP1CBP62140 327 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 LPCAT4Q643R3 524 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 SYNPRQ8TBG9 265 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 SLC25A40Q8TBP6 338 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 TRUB1Q8WWH5 349 aaKnown RBP24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 SLAMF6Q96DU3 332 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 SYT3Q9BQG1 590 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 H2AFY2Q9P0M6 372 aaPredicted RBP24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 DUSP13Q9UII6 198 aa24.02■■□□□ 1.44
SMARCC1-203ENST00000454240 DLGAP1O14490 977 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 NDUFS7O75251 213 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 CLPTM1O96005 669 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 TUBG1P23258 451 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 RGS6P49758 472 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 EIF2B1Q14232 305 aaKnown RBP24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 ZNF718Q3SXZ3 478 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 LCN1P1Q5VSP4 162 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 PRSS57Q6UWY2 283 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 SPNS3Q6ZMD2 512 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 OTOSQ8NHW6 89 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 FAM81AQ8TBF8 368 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 RDH12Q96NR8 316 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 ABHD6Q9BV23 337 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 OR2J1Q9GZK6 312 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 C8orf4Q9NR00 106 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 TUBG2Q9NRH3 451 aa24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 MYEF2Q9P2K5 600 aaKnown RBP24.01■■□□□ 1.43
SMARCC1-203ENST00000454240 J3QW42 95 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 CASQ2O14958 399 aaPredicted RBP24■■□□□ 1.43
SMARCC1-203ENST00000454240 ACSM4P0C7M7 580 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 PEX2P28328 305 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 OTX1P32242 354 aaPredicted RBP24■■□□□ 1.43
SMARCC1-203ENST00000454240 PPOXP50336 477 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 GGTLC2Q14390 218 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 LRRC36Q1X8D7 754 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 SPATA46Q5T0L3 261 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 SHEQ5VZ18 495 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 MBNL2Q5VZF2 373 aaKnown RBP24■■□□□ 1.43
SMARCC1-203ENST00000454240 COLCA1Q6ZS62 124 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 SLC16A9Q7RTY1 509 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 GID4Q8IVV7 300 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 UBE2FQ969M7 185 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 STARD10Q9Y365 291 aa24■■□□□ 1.43
SMARCC1-203ENST00000454240 CHD3Q12873 2000 aaKnown RBP24■■□□□ 1.43
SMARCC1-203ENST00000454240 SLC22A31A6NKX4 558 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 F5H5K5 113 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 H3BSA7 217 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 IGHV4-39P01824 125 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 NAA10P41227 235 aaPredicted RBP23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 KLF3P57682 345 aaPredicted RBP23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 SELENOVP59797 346 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 RHOUQ7L0Q8 258 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 GALNT4Q8N4A0 578 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 PACRGLQ8N7B6 248 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 ZNF454Q8N9F8 522 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 KLF14Q8TD94 323 aaPredicted RBP23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 RNF133Q8WVZ7 376 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 AMELYQ99218 206 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 C1QTNF5Q9BXJ0 243 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 POFUT1Q9H488 388 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 CENPMQ9NSP4 180 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 FAM118AQ9NWS6 357 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 IMPAD1Q9NX62 359 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 SMPD3Q9NY59 655 aaPredicted RBP23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 HAO2Q9NYQ3 351 aa23.99■■□□□ 1.43
SMARCC1-203ENST00000454240 ZNF878C9JN71 531 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 IGHV3-13P01766 116 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 MPV17P39210 176 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 NUDT6P53370 316 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 TPTEP56180 551 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 OGFRL1Q5TC84 451 aaPredicted RBP23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 NAA40Q86UY6 237 aa23.98■■□□□ 1.43
SMARCC1-203ENST00000454240 SPTSSAQ969W0 71 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms