RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TGIF1Q15583 401 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 BAK1Q16611 211 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 UBE2NLQ5JXB2 153 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 OTPQ5XKR4 325 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 CORO6Q6QEF8 472 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 AAED1Q7RTV5 226 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 GALNTL5Q7Z4T8 443 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 ZIC4Q8N9L1 334 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 GJC3Q8NFK1 279 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC22A4Q9H015 551 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 CLEC4MQ9H2X3 399 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 G6PC2Q9NQR9 355 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC22A13Q9Y226 551 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 WDFY4Q6ZS81 3184 aa9.35□□□□□ -0.91
VIPAS39-203ENST00000448935 A0A1W2PQ09 198 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF716A6NP11 495 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 TM4SF5O14894 197 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 GLSO94925 669 aaPredicted RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SYNGR4O95473 234 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ACTL6AO96019 429 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 PAHP00439 452 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 APOC1P02654 83 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 EIF4EP06730 217 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CFPP27918 469 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CDAP32320 146 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 STARP49675 285 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CLDN15P56746 228 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 MRPS34P82930 218 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SGCAQ16586 387 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ODF4Q2M2E3 257 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 RIPPLY2Q5TAB7 128 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 MZT2BQ6NZ67 158 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 FCRLAQ7L513 359 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 LRRTM1Q86UE6 522 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ELMOD2Q8IZ81 293 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 RDH10Q8IZV5 341 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 GPR137CQ8N3F9 429 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM251Q8N6I4 163 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ZFP62Q8NB50 900 aaPredicted RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 C15orf40Q8WUR7 153 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ASB5Q8WWX0 329 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 RAB40AQ8WXH6 277 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 TMEM45BQ96B21 275 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SCMH1Q96GD3 660 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 RBM24Q9BX46 236 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 EMC7Q9NPA0 242 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ACKR4Q9NPB9 350 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 FAM206AQ9NX38 181 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 EMC3Q9P0I2 261 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ASH2LQ9UBL3 628 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 NUFIP1Q9UHK0 495 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 FBXL3Q9UKT7 428 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 MCTS1Q9ULC4 181 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 AHCTF1Q8WYP5 2266 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 LOC107986453A0A1B0GWG9 222 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 OR6C65A6NJZ3 312 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 A6NL46 340 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF891A8MT65 544 aaPredicted RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 PROB1E7EW31 1015 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 TPPPO94811 219 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 UBL3O95164 117 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 WNT11O96014 354 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 PRKAR1AP10644 381 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 MAGEA5P43359 124 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SELENOPP49908 381 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 LHX2P50458 406 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CAPZA1P52907 286 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SLC10A1Q14973 349 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 RTP5Q14D33 572 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 P2RY14Q15391 338 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 ZNF766Q5HY98 468 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 HES5Q5TA89 166 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 GLT8D1Q68CQ7 371 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CFAP77Q6ZQR2 320 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 LUZP2Q86TE4 346 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 FAM109AQ8N4B1 249 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 OR4M1Q8NGD0 313 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 OR13C3Q8NGS6 347 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 OR10AC1Q8NH08 325 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 LGALS14Q8TCE9 139 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CPT1CQ8TCG5 803 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 HTRA1Q92743 480 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 SMAD5Q99717 465 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 WACQ9BTA9 647 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 HES7Q9BYE0 225 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 PARPBPQ9NWS1 579 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 MALT1Q9UDY8 824 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 STEAP1Q9UHE8 339 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 TBC1D24Q9ULP9 559 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 CAMK2AQ9UQM7 478 aa9.34□□□□□ -0.91
VIPAS39-203ENST00000448935 IGKV3D-15A0A087WSY6 115 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 A0A1B0GVI7 797 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 FAM166BA8MTA8 275 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 H0YC42 278 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 MAS1P04201 325 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 ZNF708P17019 499 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 CTSSP25774 331 aa9.33□□□□□ -0.92
VIPAS39-203ENST00000448935 MAGEB1P43366 347 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms