RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 C9orf170A2RU37 121 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CPED1A4D0V7 1026 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 BLACEA4D250 179 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 GPR31O00270 319 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 DCNP07585 359 aaKnown RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 GALNSP34059 522 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 RORAP35398 523 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CXADRP78310 365 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 SRSF3P84103 164 aaKnown RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ZNF169Q14929 603 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ELOCQ15369 112 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CDNFQ49AH0 187 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 COL13A1Q5TAT6 717 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 C1orf140Q5VVS0 124 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 UNQ6126/PRO20091Q6UXV3 157 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 LYG2Q86SG7 212 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 TRAPPC6BQ86SZ2 158 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 SLC25A42Q86VD7 318 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 BHLHE23Q8NDY6 225 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM185AQ8NFB2 350 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 OR52N4Q8NGI2 321 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ADAMTS18Q8TE60 1221 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ROBO4Q8WZ75 1007 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 MBD2Q9UBB5 411 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CKLFQ9UBR5 152 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 GPN3Q9UHW5 284 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 OR52A1Q9UKL2 312 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 PLCL2Q9UPR0 1127 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 PHF3Q92576 2039 aaKnown RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 KANTRA0A1W2PQU2 76 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 C2orf72A6NCS6 295 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 FAM25EA8MYX2 175 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ALG1L2C9J202 215 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 H3BMH7 237 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 EIF1AYO14602 144 aaKnown RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ZNF217O75362 1048 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 IL2RAP01589 272 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CD2P06729 351 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 IL32P24001 234 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 BDKRB2P30411 391 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 DNASE1L1P49184 302 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ARRB1P49407 418 aaPredicted RBP12.2□□□□□ -0.46
POLR1B-209ENST00000448770 SKP1P63208 163 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 QRFPP83859 136 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CLVS2Q5SYC1 327 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ZNF584Q8IVC4 421 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 CLRN3Q8NCR9 226 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 HHLA2Q9UM44 414 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 PCDHB10Q9UN67 800 aa12.2□□□□□ -0.46
POLR1B-209ENST00000448770 FTCDNL1E5RQL4 147 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 SSX5O60225 188 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 OR2F2O95006 317 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 IL12BP29460 328 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 AGTR1P30556 359 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 SLC6A8P48029 635 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 OR2F1Q13607 317 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 OR7A5Q15622 319 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 VWA2Q5GFL6 755 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 KCTD18Q6PI47 426 aaPredicted RBP12.19□□□□□ -0.46
POLR1B-209ENST00000448770 Q6ZS52 159 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 CASTOR1Q8WTX7 329 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 ADAT3Q96EY9 351 aaPredicted RBP12.19□□□□□ -0.46
POLR1B-209ENST00000448770 ARL5BQ96KC2 179 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 PELOQ9BRX2 385 aaKnown RBP12.19□□□□□ -0.46
POLR1B-209ENST00000448770 SOX7Q9BT81 388 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 FER1L5A0AVI2 2057 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 GP1BBP13224 206 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 GNB3P16520 340 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 ABCD3P28288 659 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 HRH1P35367 487 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 STARP49675 285 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 GUCA2BQ16661 112 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 PDSS1Q5T2R2 415 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 MITD1Q8WV92 249 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 THRSPQ92748 146 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 FGGYQ96C11 551 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 NARS2Q96I59 477 aaKnown RBP12.19□□□□□ -0.46
POLR1B-209ENST00000448770 NICN1Q9BSH3 213 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 NKX6-2Q9C056 277 aaPredicted RBP12.19□□□□□ -0.46
POLR1B-209ENST00000448770 DNTTIP1Q9H147 329 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 SLC2A8Q9NY64 477 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 WDFY3Q8IZQ1 3526 aa12.19□□□□□ -0.46
POLR1B-209ENST00000448770 MPTX1A8MV57 137 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 EEF1E1-BLOC1S5C9J1V9 151 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 MS4A18H0YCH9 400 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 ZNF354AO60765 605 aaPredicted RBP12.18□□□□□ -0.46
POLR1B-209ENST00000448770 MT-ATP6P00846 226 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 IGHMP01871 453 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 VSIG8P0DPA2 414 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 SLC26A5P58743 744 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 PLCXD2Q0VAA5 305 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 SNTB1Q13884 538 aaKnown RBP12.18□□□□□ -0.46
POLR1B-209ENST00000448770 MS4A18Q3C1V0 323 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 RNASE10Q5GAN6 216 aaKnown RBP12.18□□□□□ -0.46
POLR1B-209ENST00000448770 KIAA0895LQ68EN5 471 aa12.18□□□□□ -0.46
POLR1B-209ENST00000448770 TMEM88Q6PEY1 159 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms