RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 HS3ST5Q8IZT8 346 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 PROKR2Q8NFJ6 384 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 OR2T33Q8NG76 320 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 OR51L1Q8NGJ5 315 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 OR9Q1Q8NGQ5 310 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 OR2T4Q8NH00 348 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 CMBLQ96DG6 245 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 MSI2Q96DH6 328 aaKnown RBP10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 DCLRE1CQ96SD1 692 aaKnown RBP10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 COQ7Q99807 217 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 SOX7Q9BT81 388 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 HDHD2Q9H0R4 259 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 TUBG2Q9NRH3 451 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNF275Q9NSD4 429 aaPredicted RBP10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 DECR2Q9NUI1 292 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 CYB5R1Q9UHQ9 305 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 ATPIF1Q9UII2 106 aa10.85□□□□□ -0.67
PRPF40A-203ENST00000448428 PLSCR5A0PG75 271 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 TVP23AA6NH52 213 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 SPRY3O43610 288 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 RP2O75695 350 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 ATP5HO75947 161 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 GYPBP06028 91 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNF823P16415 610 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 ZNF16P17020 682 aaPredicted RBP10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 PRKACGP22612 351 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 LIPAP38571 399 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 CRYBB2P43320 205 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 GPR6P46095 362 aaPredicted RBP10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 CRMP1Q14194 572 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 KRTAP27-1Q3LI81 207 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 LYPD4Q6UWN0 246 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 PRIMA1Q86XR5 153 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 HIPK1Q86Z02 1210 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 IQCF1Q8N6M8 205 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 OR2AJ1Q8NGZ0 328 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 PTP4A1Q93096 173 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 HAVCR1Q96D42 359 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 MAP6Q96JE9 813 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 PITX2Q99697 317 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 NMNAT2Q9BZQ4 307 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 YY1AP1Q9H869 796 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 NTN4Q9HB63 628 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 MSL2Q9HCI7 577 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 CYSLTR2Q9NS75 346 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 DNAJB9Q9UBS3 223 aa10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 PURGQ9UJV8 347 aaKnown RBP10.84□□□□□ -0.67
PRPF40A-203ENST00000448428 NAV3Q8IVL0 2385 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 DYSFO75923 2080 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 IGHV1-69-2A0A0G2JMI3 117 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 LOC100289279A0A1B0GTE1 492 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 H3BN98 237 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 WNT9BO14905 357 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 PPIHO43447 177 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 TIMM8AO60220 97 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 E2F6O75461 281 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 ADH4P08319 380 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 CLUP10909 449 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 PSKH1P11801 424 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 KITLGP21583 273 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 RPS27P42677 84 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 RASSF2P50749 326 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 SLC25A1P53007 311 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 ECH1Q13011 328 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 CDK5R2Q13319 367 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 HLXQ14774 488 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 SPRNQ5BIV9 151 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 FAM209AQ5JX71 171 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 ACSM5Q6NUN0 579 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 USP51Q70EK9 711 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 NAA40Q86UY6 237 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 ZNF511Q8NB15 262 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 OR10S1Q8NGN2 331 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 TEX47Q8TBZ9 253 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 HPS1Q92902 700 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 APOBEC3DQ96AK3 386 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 COG8Q96MW5 612 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 WDR76Q9H967 626 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 PTTG3PQ9NZH4 202 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 CGGBP1Q9UFW8 167 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 KCNG2Q9UJ96 466 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 ZDHHC8Q9ULC8 765 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 CACNG2Q9Y698 323 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 TANC2Q9HCD6 1990 aa10.83□□□□□ -0.68
PRPF40A-203ENST00000448428 RIIAD1A6NNX1 92 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 F5H5K5 113 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 J3QW42 95 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 LMX1BO60663 402 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 TIPRLO75663 272 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 TGFAP01135 160 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 IFNGP01579 166 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 ACSM4P0C7M7 580 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 RAC2P15153 192 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 SPI1P17947 270 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 POU1F1P28069 291 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 FMO3P31513 532 aa10.82□□□□□ -0.68
PRPF40A-203ENST00000448428 GRK5P34947 590 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms