RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 PRSS12P56730 875 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 OR12D2P58182 307 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 GALEQ14376 348 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 C1orf140Q5VVS0 124 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 ZBTB49Q6ZSB9 765 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 RFPL4BQ6ZWI9 263 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 TEX9Q8N6V9 391 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 STPG3Q8N7X2 389 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 ICA1LQ8NDH6 482 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 ABHD4Q8TB40 342 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC35B4Q969S0 331 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 PRPF18Q99633 342 aaKnown RBP4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 MOB4Q9Y3A3 225 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 HSPE1-MOB4S4R3N1 261 aa4.82□□□□□ -1.64
BRAFP1-201ENST00000445336 MAGEA13PA6NCF6 341 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 ZNF726A6NNF4 738 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 EIF3HO15372 352 aaKnown RBP eCLIP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 FCMRO60667 390 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 LPLP06858 475 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 CXCR1P25024 350 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 ZNF84P51523 738 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 ALDH18A1P54886 795 aaKnown RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 TAF11Q15544 211 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 ZNF626Q68DY1 528 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 FAM71E1Q6IPT2 247 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 KCTD20Q7Z5Y7 419 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 OR6N1Q8NGY5 312 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 NFKBIDQ8NI38 313 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 RHEBL1Q8TAI7 183 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 ZNF420Q8TAQ5 688 aaPredicted RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 CIDECQ96AQ7 238 aaPredicted RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 FAM210BQ96KR6 192 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC25A33Q9BSK2 321 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 RNPEPL1Q9HAU8 725 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 MIEF1Q9NQG6 463 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 PCDHB16Q9NRJ7 776 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 MIF4GDA9UHW6 222 aaKnown RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 STX11O75558 287 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 JUNP05412 331 aaKnown RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 SNRPAP09012 282 aaKnown RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 GRK5P34947 590 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 CPSF6Q16630 551 aaKnown RBP eCLIP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 C18orf65Q6ZTR6 163 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 TMEM219Q86XT9 240 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 PNKDQ8N490 385 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 OR6X1Q8NH79 312 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 ZNF582Q96NG8 517 aaPredicted RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 TMEM70Q9BUB7 260 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 SMURF2Q9HAU4 748 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC13A4Q9UKG4 626 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 SUPT7LO94864 414 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 IGHG2P01859 326 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 BMP2P12643 396 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 GNA13Q14344 377 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 PDZK1Q5T2W1 519 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 H1FNTQ75WM6 255 aaPredicted RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 C1orf52Q8N6N3 182 aaKnown RBP4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 PSMA8Q8TAA3 256 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 C17orf50Q8WW18 174 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC38A4Q969I6 547 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 CDRT15Q96T59 188 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 BPIFA3Q9BQP9 254 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 NMRAL1Q9HBL8 299 aa4.81□□□□□ -1.64
BRAFP1-201ENST00000445336 NCF1BA6NI72 391 aaPredicted RBP4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 NCF1CA8MVU1 366 aaPredicted RBP4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 H0YAE9 185 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 IGLV1-47P01700 117 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 OR5H8P0DN80 308 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 NCF1P14598 390 aaPredicted RBP4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 CXCR5P32302 372 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 MRPS34P82930 218 aaKnown RBP4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 MYL5Q02045 173 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 TP53BP2Q13625 1128 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 GTF2H2Q13888 395 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 OR8B8Q15620 311 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 GTF2H2CQ6P1K8 395 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 STPG2Q8N412 459 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 OR11H1Q8NG94 326 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 OR9Q1Q8NGQ5 310 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 RGP1Q92546 391 aaPredicted RBP4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 MTERF3Q96E29 417 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 SLC41A3Q96GZ6 507 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 TMED9Q9BVK6 235 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 SIAEQ9HAT2 523 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 TMEM100Q9NV29 134 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 USE1Q9NZ43 259 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 GLTPQ9NZD2 209 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 STK38LQ9Y2H1 464 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 AP3D1O14617 1153 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 NME6O75414 186 aaPredicted RBP4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 TPPPO94811 219 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 IGHG4P01861 327 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 PGA4P0DJD7 388 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 PGA3P0DJD8 388 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 PRKAR1BP31321 381 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 ESRRGP62508 458 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 GPR50Q13585 617 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 TEDDM1Q5T9Z0 273 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 CLIP4Q8N3C7 705 aa4.8□□□□□ -1.64
BRAFP1-201ENST00000445336 UBALD1Q8TB05 177 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms