RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 FAM98BQ52LJ0 330 aaKnown RBP17.05■□□□□ 0.32
LRCH3-208ENST00000443727 PEG10Q86TG7 708 aaKnown RBP17.05■□□□□ 0.32
LRCH3-208ENST00000443727 OR2Z1Q8NG97 314 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 OR5L1Q8NGL2 311 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 OR2AJ1Q8NGZ0 328 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 PTP4A1Q93096 173 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 TMEM186Q96B77 213 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 RAB39BQ96DA2 213 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 LRGUKQ96M69 825 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 TRIM15Q9C019 465 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 FN3KQ9H479 309 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 MAGIXQ9H6Y5 334 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 ZNF665Q9H7R5 613 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 KLHL21Q9UJP4 597 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 WIPI2Q9Y4P8 454 aa17.05■□□□□ 0.32
LRCH3-208ENST00000443727 TCRBV5S2A0A599 114 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 ISPDA4D126 451 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 OR6C68A6NDL8 312 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 THBS2P35442 1172 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 DBPQ10586 325 aaPredicted RBP17.04■□□□□ 0.32
LRCH3-208ENST00000443727 LCN8Q6JVE9 175 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 SLC26A10Q8NG04 563 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 POP5Q969H6 163 aaKnown RBP17.04■□□□□ 0.32
LRCH3-208ENST00000443727 APOBEC3DQ96AK3 386 aaPredicted RBP17.04■□□□□ 0.32
LRCH3-208ENST00000443727 HAVCR1Q96D42 359 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 PITX2Q99697 317 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 COQ7Q99807 217 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 REEP1Q9H902 201 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 PTTG3PQ9NZH4 202 aa17.04■□□□□ 0.32
LRCH3-208ENST00000443727 PRPF19Q9UMS4 504 aaKnown RBP17.04■□□□□ 0.32
LRCH3-208ENST00000443727 J3QW42 95 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 CD55P08174 381 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 KITLGP21583 273 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 MAGEA2P43356 314 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 COX10Q12887 443 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 PPP1R8Q12972 351 aaKnown RBP17.03■□□□□ 0.32
LRCH3-208ENST00000443727 CDK5R2Q13319 367 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 ACSM5Q6NUN0 579 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
LRCH3-208ENST00000443727 ZBTB46Q86UZ6 589 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 LINC00346Q8IVM7 164 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 AQP11Q8NBQ7 271 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 CCDC124Q96CT7 223 aaKnown RBP17.03■□□□□ 0.32
LRCH3-208ENST00000443727 GAL3ST1Q99999 423 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 BTBD10Q9BSF8 475 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 TBC1D23Q9NUY8 699 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 SAMHD1Q9Y3Z3 626 aaKnown RBP17.03■□□□□ 0.32
LRCH3-208ENST00000443727 U3KQV3 271 aa17.03■□□□□ 0.32
LRCH3-208ENST00000443727 TRAV20A0A0B4J274 112 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 SURF4O15260 269 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 UBOX5O94941 541 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 GASTP01350 101 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 RAC2P15153 192 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 ZNF823P16415 610 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 TNFRSF1AP19438 455 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 HIST1H3AP68431 136 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 MS4A2Q01362 244 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 HLXQ14774 488 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-208ENST00000443727 HIST2H3PS2Q5TEC6 136 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 OR2T5Q6IEZ7 315 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 FAHD2BQ6P2I3 314 aaPredicted RBP17.02■□□□□ 0.32
LRCH3-208ENST00000443727 SHQ1Q6PI26 577 aaKnown RBP17.02■□□□□ 0.32
LRCH3-208ENST00000443727 HIST2H3AQ71DI3 136 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 OR5AS1Q8N127 324 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 CYB561A3Q8NBI2 242 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 PROKR2Q8NFJ6 384 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 OR4C15Q8NGM1 316 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 OR2T29Q8NH02 315 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 FAHD2AQ96GK7 314 aa17.02■□□□□ 0.32
LRCH3-208ENST00000443727 SVEP1Q4LDE5 3571 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 DNHD1Q96M86 4753 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 F5H5K5 113 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 T-ENOLP0DO92 83 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 ECH1Q13011 328 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 SPRNQ5BIV9 151 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 ZNF770Q6IQ21 691 aaPredicted RBP17.01■□□□□ 0.31
LRCH3-208ENST00000443727 SLC18B1Q6NT16 456 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 CFAP77Q6ZQR2 320 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 RASSF6Q6ZTQ3 369 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 ATG16L2Q8NAA4 619 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 OR2T4Q8NH00 348 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 ASB9Q96DX5 294 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 IL20Q9NYY1 176 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 UBAP1Q9NZ09 502 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 CUBNO60494 3623 aa17.01■□□□□ 0.31
LRCH3-208ENST00000443727 BHLHE40O14503 412 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 PYCR1P32322 319 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 ERFP50548 548 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 MICAQ29983 383 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 OR2T2Q6IF00 324 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 Q6ZR03 302 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 PHC2Q8IXK0 858 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 CLPTM1LQ96KA5 538 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 ZNF582Q96NG8 517 aaPredicted RBP17■□□□□ 0.31
LRCH3-208ENST00000443727 ATF6BQ99941 703 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 THTPAQ9BU02 230 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 TSSK6Q9BXA6 273 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 PLA2G12AQ9BZM1 189 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 CYB5R1Q9UHQ9 305 aa17■□□□□ 0.31
LRCH3-208ENST00000443727 KCNG2Q9UJ96 466 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms