RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ERVS71-1P61550 626 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 PPP1CBP62140 327 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 EIF2B1Q14232 305 aaKnown RBP10.6□□□□□ -0.71
USP1-203ENST00000442679 RSPO1Q2MKA7 263 aaPredicted RBP10.6□□□□□ -0.71
USP1-203ENST00000442679 SPATA46Q5T0L3 261 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 LCN1P1Q5VSP4 162 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 NXNL2Q5VZ03 156 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 RFPL4BQ6ZWI9 263 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 SHFQ7M4L6 423 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 LRP11Q86VZ4 500 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 GID4Q8IVV7 300 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 C1orf174Q8IYL3 243 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 LRRC75A-AS1Q8N1F1 130 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 OR10S1Q8NGN2 331 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 OR8J1Q8NGP2 316 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 FAM81AQ8TBF8 368 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 SYNPRQ8TBG9 265 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 SLAMF6Q96DU3 332 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 DOK1Q99704 481 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 ATF6BQ99941 703 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 SYT3Q9BQG1 590 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 CXXC4Q9H2H0 198 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 CENPMQ9NSP4 180 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 TBCCD1Q9NVR7 557 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 IMPAD1Q9NX62 359 aa10.6□□□□□ -0.71
USP1-203ENST00000442679 AKAP6Q13023 2319 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 E9PQ18 207 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 F5H5K5 113 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 CLPTM1O96005 669 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ZNF250P15622 560 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 PEX2P28328 305 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 RGS6P49758 472 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ATP5J2P56134 94 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 TPTEP56180 551 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 TAF13Q15543 124 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 KRTAP27-1Q3LI81 207 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ZNF718Q3SXZ3 478 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 SPATC1Q76KD6 591 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ZNF771Q7L3S4 317 aaPredicted RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 SLC16A9Q7RTY1 509 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 PACRGLQ8N7B6 248 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 SLC25A40Q8TBP6 338 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ST7LQ8TDW4 575 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 TRUB1Q8WWH5 349 aaKnown RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 IPCEF1Q8WWN9 437 aaPredicted RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 UBE2FQ969M7 185 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 SPTSSAQ969W0 71 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 MARS2Q96GW9 593 aaKnown RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 VRK1Q99986 396 aaPredicted RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 COPS4Q9BT78 406 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 ABHD6Q9BV23 337 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 OR2J1Q9GZK6 312 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 C8orf4Q9NR00 106 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 DDX28Q9NUL7 540 aaKnown RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 FAM118AQ9NWS6 357 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 NKX1-2Q9UD57 310 aaPredicted RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 FBXO9Q9UK97 447 aaPredicted RBP10.59□□□□□ -0.71
USP1-203ENST00000442679 STARD10Q9Y365 291 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 GMPPBQ9Y5P6 360 aa10.59□□□□□ -0.71
USP1-203ENST00000442679 HEATR1Q9H583 2144 aaKnown RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 LOC100130705A0A1B0GUX0 176 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 SLC22A31A6NKX4 558 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 H0YHG0 523 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 H7C417 338 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 CASQ2O14958 399 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 NDUFS7O75251 213 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 ADRA2AP08913 450 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 MRPL3P09001 348 aaKnown RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 ACSM4P0C7M7 580 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 TUBG1P23258 451 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 GCH1P30793 250 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 NUDT6P53370 316 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 HCCSP53701 268 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 KLF3P57682 345 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 SNRPGP62308 76 aaKnown RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 SLC34A1Q06495 639 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 TESK1Q15569 626 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 OGFRL1Q5TC84 451 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 NAA40Q86UY6 237 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 ZNF555Q8NEP9 628 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 OTOSQ8NHW6 89 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 KLF14Q8TD94 323 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 THEM6Q8WUY1 208 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 RNF133Q8WVZ7 376 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 APOBEC3DQ96AK3 386 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 COG8Q96MW5 612 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 ZNF582Q96NG8 517 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 RDH12Q96NR8 316 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 YIPF3Q9GZM5 350 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 POFUT1Q9H488 388 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 DYNLRB1Q9NP97 96 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 TUBG2Q9NRH3 451 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 SMPD3Q9NY59 655 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 MYEF2Q9P2K5 600 aaKnown RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 LAMP5Q9UJQ1 280 aa10.58□□□□□ -0.72
USP1-203ENST00000442679 MAP1AP78559 2803 aaPredicted RBP10.58□□□□□ -0.72
USP1-203ENST00000442679 A0A1W2PPW3 197 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms