RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 NOTOA8MTQ0 251 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM25AB3EWG3 89 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM25CB3EWG5 89 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM25GB3EWG6 89 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF587BE7ETH6 402 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 INMT-MINDY4F8WBC2 141 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FZD7O75084 574 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 AKR7A3O95154 331 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 ABHD16AO95870 558 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 IFI30P13284 250 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 VAMP1P23763 118 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 IL18Q14116 193 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM205BPQ63HN1 556 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 PLET1Q6UQ28 207 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR13C2Q8NGS9 318 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 DLL4Q9NR61 685 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 POLQO75417 2590 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 A8MVM7 634 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 M0R1B8 84 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 IMPA2O14732 288 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 LYZL6O75951 148 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 WNT11O96014 354 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 PTH2RP49190 550 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 DGCR2P98153 550 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 POU3F1Q03052 451 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 TRAM1Q15629 374 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF613Q6PF04 617 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 ULK3Q6PHR2 472 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGFL2Q6UWQ7 119 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 NPEPL1Q8NDH3 523 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM71CQ8NEG0 241 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FANK1Q8TC84 345 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZPLD1Q8TCW7 415 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 LIPHQ8WWY8 451 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 SMIM19Q96E16 107 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 GPX7Q96SL4 187 aaPredicted RBP6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 PRRG3Q9BZD7 231 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 ULBP2Q9BZM5 246 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 CDH20Q9HBT6 801 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 COPS3Q9UNS2 423 aa6.55□□□□□ -1.36
CDC42BPA-208ENST00000442054 FER1L5A0AVI2 2057 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 A0A0B4J203 849 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 TO15178 435 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 TSPAN2O60636 221 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF354AO60765 605 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 C1QL1O75973 258 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGF2P01344 180 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CRYAAP02489 173 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 HPXP02790 462 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 TCRBP04435 133 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CD3EP07766 207 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CDK5R1Q15078 307 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ASPHD2Q6ICH7 369 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM214BQ7L5A3 538 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 SYS1Q8N2H4 156 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 OR51A7Q8NH64 312 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ENKURQ8TC29 256 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 HYLS1Q96M11 299 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 OPN3Q9H1Y3 402 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ANKHD1Q8IWZ3 2542 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 IGKV1D-42A0A075B6H8 117 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ZNF593O00488 134 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 UBL3O95164 117 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 MT-ND5P03915 603 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 RAF1P04049 648 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CSNK1A1P48729 337 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 DIO1P49895 249 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 SNRPD2P62316 118 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 MAB21L1Q13394 359 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 DYRK1AQ13627 763 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ACSF3Q4G176 576 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ESCO2Q56NI9 601 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 PYHIN1Q6K0P9 492 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 MZT2BQ6NZ67 158 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 MZT2AQ6P582 158 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 LYPD4Q6UWN0 246 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 PLXDC2Q6UX71 529 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 FAM122BQ7Z309 247 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 HDDC2Q7Z4H3 204 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 COMMD2Q86X83 199 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 SIAH3Q8IW03 269 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 SMIM4Q8WVI0 70 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 RFT1Q96AA3 541 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 C4orf36Q96KX1 117 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 SFXN3Q9BWM7 321 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ESRP2Q9H6T0 727 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 GLRX2Q9NS18 164 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 DDX28Q9NUL7 540 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 HDGFL3Q9Y3E1 203 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 RHBDD3Q9Y3P4 386 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 NUBP2Q9Y5Y2 271 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ADAM10O14672 748 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 ORC5O43913 435 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CFDP00746 253 aaPredicted RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 RBM34P42696 430 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 NANOS3P60323 173 aaKnown RBP6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 RAB35Q15286 201 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 CD226Q15762 336 aa6.54□□□□□ -1.36
CDC42BPA-208ENST00000442054 C1orf140Q5VVS0 124 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms