RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PLA1AQ53H76 456 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 ELFN2Q5R3F8 820 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 ATAD3CQ5T2N8 411 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 HES5Q5TA89 166 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 OLFML2AQ68BL7 652 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 GLT8D1Q68CQ7 371 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 OR5M10Q6IEU7 315 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 JMJD6Q6NYC1 403 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 KLHL24Q6TFL4 600 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 ASB18Q6ZVZ8 466 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 LINGO2Q7L985 606 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 RPS19BP1Q86WX3 136 aaKnown RBP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 LSRQ86X29 649 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 TMEM156Q8N614 296 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 ESX1Q8N693 406 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 WDSUB1Q8N9V3 476 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 OR6M1Q8NGM8 313 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 OR1J4Q8NGS1 313 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 OR5H6Q8NGV6 325 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 AKAP1Q92667 903 aaKnown RBP eCLIP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 UPRTQ96BW1 309 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 FOXRED1Q96CU9 486 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 FAM210AQ96ND0 272 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 OR5B2Q96R09 309 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 GFI1Q99684 422 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 PIGQQ9BRB3 760 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 NAA11Q9BSU3 229 aaPredicted RBP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 MRPL13Q9BYD1 178 aaKnown RBP8.13□□□□□ -1.11
HDAC6-209ENST00000440653 MMP28Q9H239 520 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 C1orf198Q9H425 327 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 ING3Q9NXR8 418 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 TAS2R8Q9NYW2 309 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 PTTG3PQ9NZH4 202 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 PADI1Q9ULC6 663 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 POLR1DQ9Y2S0 133 aa8.13□□□□□ -1.11
HDAC6-209ENST00000440653 CCDC187A0A096LP49 1063 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 A0A1W2PPK0 400 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 C7orf66A4D0T2 115 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SULT2B1O00204 365 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 P04436 131 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SERPINA7P05543 415 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ERCC1P07992 297 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 JMJD7P0C870 316 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 HLA-DOBP13765 273 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 IL11P20809 199 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SRD5A2P31213 254 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SOX2P48431 317 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 GRB2P62993 217 aaKnown RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 FMODQ06828 376 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 MFGE8Q08431 387 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 KLF9Q13886 244 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SSPNQ14714 243 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 C10orf128Q5T292 105 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 TMEM164Q5U3C3 297 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 PRAMEF20Q5VT98 475 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 RAET1LQ5VY80 246 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 TMEM225Q6GV28 225 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 TMPPEQ6ZT21 453 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 DCXRQ7Z4W1 244 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 PPP1R32Q7Z5V6 425 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 FGD2Q7Z6J4 655 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ADGRE4PQ86SQ3 457 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 CMTM4Q8IZR5 234 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 CCDC54Q8NEL0 328 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 OR2AJ1Q8NGZ0 328 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SYNPRQ8TBG9 265 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 UBASH3BQ8TF42 649 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 PTX4Q96A99 478 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 PHF21AQ96BD5 680 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 IP6K3Q96PC2 410 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ABHD1Q96SE0 405 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 AMELYQ99218 206 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 MESP1Q9BRJ9 268 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 SF3B5Q9BWJ5 86 aaKnown RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 B3GNT4Q9C0J1 378 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 NEK6Q9HC98 313 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ZNF160Q9HCG1 818 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 DDX28Q9NUL7 540 aaKnown RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 MED29Q9NX70 200 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ABI3Q9P2A4 366 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 NLKQ9UBE8 527 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 OR5V1Q9UGF6 321 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 NUFIP1Q9UHK0 495 aaKnown RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 CYB5R1Q9UHQ9 305 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 FBXL2Q9UKC9 423 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 OR52A1Q9UKL2 312 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 TCFL5Q9UL49 500 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 GTF2A1LQ9UNN4 478 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 RBMX2Q9Y388 322 aaKnown RBP8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ALG5Q9Y673 324 aa8.12□□□□□ -1.11
HDAC6-209ENST00000440653 ANKHD1Q8IWZ3 2542 aaKnown RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 RP1L1Q8IWN7 2480 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-209ENST00000440653 TRAV8-7A0A075B6U6 113 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 A0A0B4J293 547 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 A0A1W2PPL8 197 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 C2orf72A6NCS6 295 aa8.11□□□□□ -1.11
HDAC6-209ENST00000440653 ZNF726A6NNF4 738 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms