RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 OR5K1Q8NHB7 308 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 PYDC1Q8WXC3 89 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 NRBF2Q96F24 287 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 HINT3Q9NQE9 182 aaKnown RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 EIF3KQ9UBQ5 218 aaKnown RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 TMEFF2Q9UIK5 374 aaPredicted RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 NDRG4Q9ULP0 352 aaKnown RBP11.32□□□□□ -0.6
LINC00399-201ENST00000439008 POLR1DQ9Y2S0 133 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
LINC00399-201ENST00000439008 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00399-201ENST00000439008 IGHV4-61A0A0C4DH41 118 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 RIIAD1A6NNX1 92 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 C17orf100A8MU93 164 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 M0R129 80 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 SURF4O15260 269 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 HLA-DQA2P01906 255 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 HOXB4P17483 251 aaPredicted RBP11.31□□□□□ -0.6
LINC00399-201ENST00000439008 NR4A2P43354 598 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 PDLIM4P50479 330 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 PRSS12P56730 875 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 RIN1Q13671 783 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 HLXQ14774 488 aaPredicted RBP11.31□□□□□ -0.6
LINC00399-201ENST00000439008 NKPD1Q17RQ9 610 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF718Q3SXZ3 478 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 SLC27A4Q6P1M0 643 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 Q6ZR03 302 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 COLCA1Q6ZS62 124 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF786Q8N393 782 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 NEU4Q8WWR8 484 aaPredicted RBP11.31□□□□□ -0.6
LINC00399-201ENST00000439008 AMELYQ99218 206 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 COQ7Q99807 217 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 SOX7Q9BT81 388 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 BPESC1Q9GZL8 116 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 SEMA6AQ9H2E6 1030 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 MS4A5Q9H3V2 200 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 SLC25A19Q9HC21 320 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 ATPIF1Q9UII2 106 aa11.31□□□□□ -0.6
LINC00399-201ENST00000439008 LOC390937A0A1W2PQ73 354 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 WNT9BO14905 357 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 LILRA1O75019 489 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 RP2O75695 350 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 ACSM4P0C7M7 580 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 SLC25A16P16260 332 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 SLC2A5P22732 501 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 FASP25445 335 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 GIFP27352 417 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 CRISP1P54107 249 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 ACTR3P61158 418 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 CCL8P80075 99 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 LOXL1Q08397 574 aaPredicted RBP11.3□□□□□ -0.6
LINC00399-201ENST00000439008 TRIP10Q15642 601 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 KDM4DQ6B0I6 523 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 PLBD1Q6P4A8 553 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 CPOQ8IVL8 374 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 ST7LQ8TDW4 575 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 UBASH3BQ8TF42 649 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 CMBLQ96DG6 245 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 PITX2Q99697 317 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 PKP2Q99959 881 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 HDHD2Q9H0R4 259 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 MARCH7Q9H992 704 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 ELOVL3Q9HB03 270 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 MSL2Q9HCI7 577 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 PAPOLBQ9NRJ5 636 aaKnown RBP11.3□□□□□ -0.6
LINC00399-201ENST00000439008 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.3□□□□□ -0.6
LINC00399-201ENST00000439008 CACNG2Q9Y698 323 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 TANC2Q9HCD6 1990 aa11.3□□□□□ -0.6
LINC00399-201ENST00000439008 SVEP1Q4LDE5 3571 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 MXRA5Q9NR99 2828 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 G3V2T6 193 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF593O00488 134 aaPredicted RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 CIB2O75838 187 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 IFNGP01579 166 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 IGHV1-46P01743 117 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 CSF3P09919 207 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF3P17036 446 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 FMO3P31513 532 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 IL2RGP31785 369 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 POLR2IP36954 125 aaKnown RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 PTGES3Q15185 160 aaKnown RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 DCXRQ7Z4W1 244 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 BCDIN3DQ7Z5W3 292 aaKnown RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 PARP8Q8N3A8 854 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 OR6K6Q8NGW6 343 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 OR2AJ1Q8NGZ0 328 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 ZMYND19Q96E35 227 aaPredicted RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 ATF6BQ99941 703 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 GABARAPL1Q9H0R8 117 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 OR51V1Q9H2C8 321 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 ZNF556Q9HAH1 456 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 SLCO1C1Q9NYB5 712 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 PTTG3PQ9NZH4 202 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
LINC00399-201ENST00000439008 PURGQ9UJV8 347 aaKnown RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 FBXO9Q9UK97 447 aaPredicted RBP11.29□□□□□ -0.6
LINC00399-201ENST00000439008 LRP5LA4QPB2 252 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 SAC3D1A6NKF1 404 aa11.28□□□□□ -0.6
LINC00399-201ENST00000439008 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms