RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SRP9P49458 86 aaKnown RBP6.55□□□□□ -1.36
VPS50-204ENST00000438395 RGS6P49758 472 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 GZMMP51124 257 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 SELENOWP63302 87 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 SF3A3Q12874 501 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-204ENST00000438395 PSG7Q13046 419 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 KLF10Q13118 480 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 BAMBIQ13145 260 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 AQP6Q13520 282 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 KRR1Q13601 381 aaKnown RBP6.55□□□□□ -1.36
VPS50-204ENST00000438395 ENDOGQ14249 297 aaKnown RBP6.55□□□□□ -1.36
VPS50-204ENST00000438395 TMEM155Q4W5P6 130 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 FGD3Q5JSP0 725 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 GPR139Q6DWJ6 353 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 SLC27A4Q6P1M0 643 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 DNM1P34Q6PK57 102 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 FOXL2NBQ6ZUU3 175 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 ADCK1Q86TW2 530 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 GLB1L2Q8IW92 636 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 RNF113BQ8IZP6 322 aaKnown RBP6.55□□□□□ -1.36
VPS50-204ENST00000438395 OR5L1Q8NGL2 311 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 ITLN1Q8WWA0 313 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 FAM162AQ96A26 154 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 SLC25A28Q96A46 364 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 RCN3Q96D15 328 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 CMBLQ96DG6 245 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 PLEKHA8Q96JA3 519 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 SAMD8Q96LT4 415 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 ZNF583Q96ND8 569 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 MS4A7Q9GZW8 240 aaPredicted RBP6.55□□□□□ -1.36
VPS50-204ENST00000438395 FGFR1OP2Q9NVK5 253 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 TBCCD1Q9NVR7 557 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 KIF17Q9P2E2 1029 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 ASH2LQ9UBL3 628 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 LRCH1Q9Y2L9 728 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 ADAM18Q9Y3Q7 739 aa6.55□□□□□ -1.36
VPS50-204ENST00000438395 TEX13CA0A0J9YWL9 993 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OR6C6A6NF89 314 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 DNAJC9-AS1A6NH13 148 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 CXCR6O00574 342 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 NDUFAB1O14561 156 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 SLC22A2O15244 555 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 SLC16A7O60669 478 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 KHDRBS3O75525 346 aaKnown RBP6.54□□□□□ -1.36
VPS50-204ENST00000438395 NDUFB2O95178 105 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 IRF2P14316 349 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 RAC2P15153 192 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 KITLGP21583 273 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 PRTN3P24158 256 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 LIPEQ05469 1076 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 PRKCDQ05655 676 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ZNF154Q13106 437 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ZMYND11Q15326 602 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ZBED5Q49AG3 693 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 PGM2L1Q6PCE3 622 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 MBOAT2Q6ZWT7 520 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 DOK3Q7L591 496 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 VTCN1Q7Z7D3 282 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.54□□□□□ -1.36
VPS50-204ENST00000438395 WFDC3Q8IUB2 231 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 C1orf87Q8N0U7 546 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OR5AS1Q8N127 324 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ZNF283Q8N7M2 679 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 DEFB108BQ8NET1 73 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OR10AD1Q8NGE0 317 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OR13G1Q8NGZ3 307 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OR1F12Q8NHA8 337 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 RASD2Q96D21 266 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 Q96M85 177 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ZNF582Q96NG8 517 aaPredicted RBP6.54□□□□□ -1.36
VPS50-204ENST00000438395 DUX5Q96PT3 197 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OR2V2Q96R30 315 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 SSBP3Q9BWW4 388 aaPredicted RBP6.54□□□□□ -1.36
VPS50-204ENST00000438395 HCAR1Q9BXC0 346 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 SYT4Q9H2B2 425 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ANKRD19PQ9H560 264 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 PATZ1Q9HBE1 687 aaKnown RBP6.54□□□□□ -1.36
VPS50-204ENST00000438395 ESM1Q9NQ30 184 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 SAR1AQ9NR31 198 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 IL19Q9UHD0 177 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 IL20RAQ9UHF4 553 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 OPN4Q9UHM6 478 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 ATPIF1Q9UII2 106 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 A4GNTQ9UNA3 340 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 AURKCQ9UQB9 309 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 PCDHGB1Q9Y5G3 927 aa6.54□□□□□ -1.36
VPS50-204ENST00000438395 CEACAM18A8MTB9 384 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 J3KTA2 159 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 SOCS2O14508 198 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 SERPINA1P01009 418 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 FSHBP01225 129 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 H1F0P07305 194 aaKnown RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 HKR1P10072 659 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 CTLA4P16410 223 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 SELEP16581 610 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 ZNF12P17014 697 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 CPT2P23786 658 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
VPS50-204ENST00000438395 SDHAP31040 664 aa6.53□□□□□ -1.36
VPS50-204ENST00000438395 RPS6KA3P51812 740 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms