RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MIDNQ504T8 468 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 FAM72AQ5TYM5 149 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 B3GNTL1Q67FW5 361 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 FAM72DQ6L9T8 149 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 RNASEKQ6P5S7 137 aaKnown RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 CYHR1Q6ZMK1 362 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 FAM72BQ86X60 149 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 LRIT1Q9P2V4 623 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 MRC1P22897 1456 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 WNT11O96014 354 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 SOWAHCQ53LP3 525 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM128Q5BJH2 165 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 DRAM2Q6UX65 266 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF573Q86YE8 665 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 LILRA2Q8N149 483 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 SIRT3Q9NTG7 399 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 POLDIP2Q9Y2S7 368 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 WNT6Q9Y6F9 365 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 C1orf105O95561 183 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ELFN2Q5R3F8 820 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 NLGN4YQ8NFZ3 816 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 SLC26A10Q8NG04 563 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 YIPF6Q96EC8 236 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF2Q9BSG1 426 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF355PQ9NSJ1 428 aa10.58□□□□□ -0.72
PTCH1-209ENST00000437951 WRAP73Q9P2S5 460 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM238LA0A1B0GVL6 79 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 IGLON5A6NGN9 336 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 A6NJY4 79 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 CER1O95813 267 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 NRASP01111 189 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 HRASP01112 189 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 KRASP01116 189 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 ALOX5APP20292 161 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 AGFG1P52594 562 aaKnown RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 ISL1P61371 349 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 OR2D3Q8NGH3 330 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 NMNAT3Q96T66 252 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 EDEM2Q9BV94 578 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 NAT8BQ9UHF3 227 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 TIMM9Q9Y5J7 89 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 RGPD8O14715 1765 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 FGF18O76093 207 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 TTRP02766 147 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 OR5AL1P0C617 328 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 CLDN10P78369 228 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 KCNK15Q9H427 330 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 POM121BA6NF01 834 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 CNIH1O95406 144 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 DHRS13Q6UX07 377 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 FAM71CQ8NEG0 241 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 SMIM4Q8WVI0 70 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 PACRGQ96M98 296 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 ANGPTL4Q9BY76 406 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 ARNT2Q9HBZ2 717 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 KIAA1456Q9P272 454 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 PISDQ9UG56 409 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 VDAC3Q9Y277 283 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 MTCL1Q9Y4B5 1905 aaKnown RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 RAB38P57729 211 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 C17orf67Q0P5P2 114 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 IGSF8Q969P0 613 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 SMIM19Q96E16 107 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 FRS3O43559 492 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 GALR2O43603 387 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 TBC1D28Q2M2D7 210 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 LEXMQ3ZCV2 418 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 PLA1AQ53H76 456 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 SYT14P1Q58G82 188 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 SPANXN5Q5MJ07 72 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 LRRC18Q8N456 261 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 OR10G3Q8NGC4 313 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 LIPHQ8WWY8 451 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 ZNF583Q96ND8 569 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 ATOH8Q96SQ7 321 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 MED20Q9H944 212 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 DYNLRB1Q9NP97 96 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 NOSIPQ9Y314 301 aaKnown RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 SERINC4A6NH21 518 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 WDR1O75083 606 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 PGA3P0DJD8 388 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 OR2A2Q6IF42 318 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 WDR74Q6RFH5 385 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 CPEB2Q7Z5Q1 589 aaKnown RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 OR51F2Q8NH61 342 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 BCL2L2Q92843 193 aaPredicted RBP10.57□□□□□ -0.72
PTCH1-209ENST00000437951 PTDSS2Q9BVG9 487 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 C5AR2Q9P296 337 aa10.57□□□□□ -0.72
PTCH1-209ENST00000437951 COX7A2P2O60397 106 aa10.56□□□□□ -0.72
PTCH1-209ENST00000437951 SLC25A4P12235 298 aa10.56□□□□□ -0.72
PTCH1-209ENST00000437951 PCSK6P29122 969 aa10.56□□□□□ -0.72
PTCH1-209ENST00000437951 CD68P34810 354 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-209ENST00000437951 SCAND1P57086 179 aa10.56□□□□□ -0.72
PTCH1-209ENST00000437951 HIST3H3Q16695 136 aa10.56□□□□□ -0.72
PTCH1-209ENST00000437951 ETV3LQ6ZN32 361 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms