RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 BTG1P62324 171 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 HSF2Q03933 536 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 POU4F3Q15319 338 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 SLC22A6Q4U2R8 563 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 ZBTB37Q5TC79 503 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 TIGD3Q6B0B8 471 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 TMEM65Q6PI78 240 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 OR4S1Q8NGB4 309 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 OR51S1Q8NGJ8 323 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 LRFN5Q96NI6 719 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 GNRHR2Q96P88 292 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 DEFB126Q9BYW3 111 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 PTGES2Q9H7Z7 377 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 METTL7AQ9H8H3 244 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 PISDQ9UG56 409 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
CUX1-206ENST00000437600 NPIPA1Q9UND3 350 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 DHDHQ9UQ10 334 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 IGF2RP11717 2491 aa8.45□□□□□ -1.06
CUX1-206ENST00000437600 NCOA6Q14686 2063 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 A0A1W2PNU3 283 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 C7orf66A4D0T2 115 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 VSTM2BA6NLU5 285 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 TMEM212A6NML5 194 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 TO15178 435 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 CTAG2O75638 210 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 UMODP07911 640 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 ANXA3P12429 323 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 DUSP3P51452 185 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 NKPD1Q17RQ9 610 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 SLC22A10Q63ZE4 541 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 C17orf107Q6ZR85 190 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 NLRC3Q7RTR2 1065 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 SLC26A10Q8NG04 563 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 MCHR2Q969V1 340 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 FGGYQ96C11 551 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 HYLS1Q96M11 299 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 OR5B2Q96R09 309 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 USB1Q9BQ65 265 aaKnown RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 C1QTNF6Q9BXI9 259 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 ZC4H2Q9NQZ6 224 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 DLL4Q9NR61 685 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 MRPL39Q9NYK5 338 aaKnown RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 EMC3Q9P0I2 261 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 KLHL13Q9P2N7 655 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 STEAP1Q9UHE8 339 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 GPN3Q9UHW5 284 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 ANKRD11Q6UB99 2663 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 MED13Q9UHV7 2174 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 APC2O95996 2303 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 A0A1W2PPL8 197 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 FTCDNL1E5RQL4 147 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 ZNHIT1O43257 154 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 RBBP9O75884 186 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 RGS11O94810 467 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 GTF2F2P13984 249 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 ACP1P24666 158 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 RIDAP52758 137 aaKnown RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 MYBPHQ13203 477 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 TMEM176BQ3YBM2 270 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 TMEM225Q6GV28 225 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 ZNF782Q6ZMW2 699 aaPredicted RBP8.44□□□□□ -1.06
CUX1-206ENST00000437600 LUZP2Q86TE4 346 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 NAA40Q86UY6 237 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 SLC43A2Q8N370 569 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 MEIOBQ8N635 442 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 ACBD4Q8NC06 268 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 OR4C16Q8NGL9 310 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 TMEM14AQ9Y6G1 99 aa8.44□□□□□ -1.06
CUX1-206ENST00000437600 KLF7O75840 302 aaPredicted RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 FGF5P12034 268 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 HSF1Q00613 529 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 EGR3Q06889 387 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ZFP36L1Q07352 338 aaKnown RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 C17orf67Q0P5P2 114 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 TRIP6Q15654 476 aaKnown RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 CSRP2Q16527 193 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 EMC4Q5J8M3 183 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 H1FNTQ75WM6 255 aaPredicted RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 TMED4Q7Z7H5 227 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 CD163Q86VB7 1156 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 COMMD7Q86VX2 200 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 COMMD2Q86X83 199 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 FTMTQ8N4E7 242 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 OR13C3Q8NGS6 347 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 RPS4Y2Q8TD47 263 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 RASL10BQ96S79 203 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 EVA1AQ9H8M9 152 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 PPP4R1LQ9P1A2 415 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 MGAT4CQ9UBM8 478 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 TMEM272A0A1B0GTI8 110 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 C5orf63A6NC05 138 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 GLSO94925 669 aaPredicted RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 MPC2O95563 127 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 ZNF883P0CG24 379 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 VSIG10L2P0DP72 767 aa8.43□□□□□ -1.06
CUX1-206ENST00000437600 HOXB1P14653 301 aaPredicted RBP8.43□□□□□ -1.06
CUX1-206ENST00000437600 MAPK3P27361 379 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms