RNA–Protein interactions for RNA: ENST00000437048.6

VPS53-204, Transcript of VPS53, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS53, Length 13,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-204ENST00000437048 EIF3IQ13347 325 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 PHF19Q5T6S3 580 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 MRM1Q6IN84 353 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 C1orf174Q8IYL3 243 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 NEURL2Q9BR09 285 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PARD6AQ9NPB6 346 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 OR14J1Q9UGF5 321 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 NAT8BQ9UHF3 227 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 GPR52Q9Y2T5 361 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PHF1O43189 567 aaPredicted RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 YBX1P67809 324 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 LINC01559Q495D7 138 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 DHRS11Q6UWP2 260 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 FAM217AQ8IXS0 508 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 OR4S1Q8NGB4 309 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 OR2A1Q8NGT9 310 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 SNED1Q8TER0 1413 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PLCH1Q4KWH8 1693 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 SERTM1A2A2V5 107 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 FURINP09958 794 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 NHLH2Q02577 135 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 C18orf63Q68DL7 685 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PWWP2BQ6NUJ5 590 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 ZBTB44Q8NCP5 570 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 NUDCD2Q8WVJ2 157 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PMEPA1Q969W9 287 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PRR11Q96HE9 360 aaPredicted RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 NIPSNAP1Q9BPW8 284 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 HINT2Q9BX68 163 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 OCIAD1Q9NX40 245 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 USP36Q9P275 1121 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 C5orf52A6NGY3 159 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 SLC31A1O15431 190 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 SDHAP31040 664 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 CD200P41217 278 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 CTBSQ01459 385 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 PRAMEF19Q5SWL8 479 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 ZNF573Q86YE8 665 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 CARFQ8N187 725 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 C2orf73Q8N5S3 287 aaPredicted RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 OR5M9Q8NGP3 310 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 GPR87Q9BY21 358 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 CNIH4Q9P003 139 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 HEATR5BQ9P2D3 2071 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 ZNFX1Q9P2E3 1918 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 TUBGCP6Q96RT7 1819 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 LTBP3Q9NS15 1303 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 IGKV6-21A0A0C4DH24 114 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 SOWAHBA6NEL2 793 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 ZNF732B4DXR9 585 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 B4GALT2O60909 372 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 WNT11O96014 354 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 HOXA11P31270 313 aaPredicted RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 SRP14P37108 136 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 NPBWR2P48146 333 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 BTG2P78543 158 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 FOXK2Q01167 660 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 IL24Q13007 206 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 DUSP5Q16690 384 aa6.59□□□□□ -1.35
VPS53-204ENST00000437048 BOLLQ8N9W6 283 aaKnown RBP6.59□□□□□ -1.35
VPS53-204ENST00000437048 FAM227AF5H4B4 570 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 BLVRBP30043 206 aaPredicted RBP6.59□□□□□ -1.36
VPS53-204ENST00000437048 LIPAP38571 399 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 PTGFRP43088 359 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 SLC25A1P53007 311 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 PIGPP57054 158 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 ZNF596Q8TC21 504 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 RHBDD3Q9Y3P4 386 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 DMRT1Q9Y5R6 373 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 HEXAP06865 529 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 AREGP15514 252 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 STUMQ69YW2 141 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 IL22RA1Q8N6P7 574 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 CELF2-AS1Q8N7Q2 184 aa6.59□□□□□ -1.36
VPS53-204ENST00000437048 STATHP02808 62 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 SNRPEP62304 92 aaKnown RBP6.58□□□□□ -1.36
VPS53-204ENST00000437048 CDONQ4KMG0 1287 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 GLYATL3Q5SZD4 288 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 TMEM71Q6P5X7 295 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 THNSL2Q86YJ6 484 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 RSG1Q9BU20 258 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 EGLN1Q9GZT9 426 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 CHRNA10Q9GZZ6 450 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 CA10Q9NS85 328 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 GOLT1BQ9Y3E0 138 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 FLVCR1Q9Y5Y0 555 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 CACNA1SQ13698 1873 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 M0R296 226 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 LIPFP07098 398 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 RRADP55042 308 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 ODF4Q2M2E3 257 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 JMJD6Q6NYC1 403 aaPredicted RBP6.58□□□□□ -1.36
VPS53-204ENST00000437048 ADAMTSL4Q6UY14 1074 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 PCNPQ8WW12 178 aaKnown RBP6.58□□□□□ -1.36
VPS53-204ENST00000437048 NXPE3Q969Y0 559 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 ADTRPQ96IZ2 230 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 LCORQ96JN0 433 aaPredicted RBP6.58□□□□□ -1.36
VPS53-204ENST00000437048 A8MU76 341 aa6.58□□□□□ -1.36
VPS53-204ENST00000437048 GEMIN2O14893 280 aaKnown RBP6.58□□□□□ -1.36
VPS53-204ENST00000437048 TRAPPC6AO75865 159 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms