RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DNM1P34Q6PK57 102 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 CORO6Q6QEF8 472 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 SMARCD3Q6STE5 483 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 DPY19L2P2Q6ZN68 376 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 ATG16L2Q8NAA4 619 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 FAM216AQ8WUB2 273 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 CMTM5Q96DZ9 223 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 ERMAPQ96PL5 475 aaPredicted RBP14.39□□□□□ -0.11
TRIM39-209ENST00000428728 SIGLEC11Q96RL6 698 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 GPA33Q99795 319 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 FAM107BQ9H098 131 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 PATZ1Q9HBE1 687 aaKnown RBP14.39□□□□□ -0.11
TRIM39-209ENST00000428728 MED4Q9NPJ6 270 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 ESM1Q9NQ30 184 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 DCAF13Q9NV06 445 aaKnown RBP14.39□□□□□ -0.11
TRIM39-209ENST00000428728 IL19Q9UHD0 177 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 LHFPL6Q9Y693 200 aa14.39□□□□□ -0.11
TRIM39-209ENST00000428728 RAC2P15153 192 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 RGS6P49758 472 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 MMP16P51512 607 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 PRSS12P56730 875 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 TMEM155Q4W5P6 130 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 ARMCX4Q5H9R4 360 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 OR2T2Q6IF00 324 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 LEG1Q6P5S2 330 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 JAZF1Q86VZ6 243 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 BHLHE23Q8NDY6 225 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 DEFB108BQ8NET1 73 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 ZNF420Q8TAQ5 688 aaPredicted RBP14.38□□□□□ -0.11
TRIM39-209ENST00000428728 PTP4A1Q93096 173 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 DHRS1Q96LJ7 313 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 HDHD2Q9H0R4 259 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 MYLK2Q9H1R3 596 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 WDR76Q9H967 626 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 MMP26Q9NRE1 261 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 ATPIF1Q9UII2 106 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 PPIAL4AQ9Y536 164 aa14.38□□□□□ -0.11
TRIM39-209ENST00000428728 IGLV1-36A0A0B4J1U3 117 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 IGHV3-64DA0A0J9YX35 117 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 GADD45GO95257 159 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 TXNDC12O95881 172 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 CRABP1P29762 137 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 KCNMB1Q16558 191 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 PGM2L1Q6PCE3 622 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 LRRC28Q86X40 367 aaPredicted RBP14.37□□□□□ -0.11
TRIM39-209ENST00000428728 LINC00346Q8IVM7 164 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 C3orf56Q8N813 242 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 OR5L1Q8NGL2 311 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 APOBEC3DQ96AK3 386 aaPredicted RBP14.37□□□□□ -0.11
TRIM39-209ENST00000428728 NMNAT3Q96T66 252 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 COQ7Q99807 217 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 FUZQ9BT04 418 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 PLA2G12AQ9BZM1 189 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 OR52D1Q9H346 318 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 FN3KQ9H479 309 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 GCM1Q9NP62 436 aa14.37□□□□□ -0.11
TRIM39-209ENST00000428728 PPIAL4EA0A075B759 164 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 PPIAL4CA0A0B4J2A2 164 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 F5H0A9 414 aaPredicted RBP14.36□□□□□ -0.11
TRIM39-209ENST00000428728 PPIAL4DF5H284 164 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 TRAPPC2LH3BP13 241 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 TMEM178BH3BS89 294 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 J3QW42 95 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 ZNF205O95201 554 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 RENP00797 406 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 PPIAL4FP0DN26 164 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 FPR2P25090 351 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 PRDX6P30041 224 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 SLC6A6P31641 620 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 MDH2P40926 338 aaKnown RBP14.36□□□□□ -0.11
TRIM39-209ENST00000428728 ESCO2Q56NI9 601 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 FBXW12Q6X9E4 464 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 ZDHHC22Q8N966 263 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 GJC3Q8NFK1 279 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 OR8G5Q8NG78 346 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 OR4K13Q8NH42 304 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 MEGF10Q96KG7 1140 aa14.36□□□□□ -0.11
TRIM39-209ENST00000428728 SRA1Q9HD15 236 aaKnown RBP14.36□□□□□ -0.11
TRIM39-209ENST00000428728 RPRD1BQ9NQG5 326 aaKnown RBP14.36□□□□□ -0.11
TRIM39-209ENST00000428728 TMEM89A2RUT3 159 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 CEACAM18A8MTB9 384 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 H0YL77 283 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 OR10H3O60404 316 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 CYB5R3P00387 301 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 SEMG1P04279 462 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 HIST1H1CP16403 213 aaKnown RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 ZNF12P17014 697 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 MSX2P35548 267 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 SLC6A9P48067 706 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 COMPP49747 757 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 UBA52P62987 128 aaKnown RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 HIST1H3AP68431 136 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 COX10Q12887 443 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 ZNF154Q13106 437 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 HIST2H3PS2Q5TEC6 136 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 CFAP77Q6ZQR2 320 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 HIST2H3AQ71DI3 136 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 OR6V1Q8N148 313 aa14.35□□□□□ -0.11
TRIM39-209ENST00000428728 MUC20Q8N307 709 aaPredicted RBP14.35□□□□□ -0.11
TRIM39-209ENST00000428728 SIGLECL1Q8N7X8 197 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms