RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 TCN2P20062 427 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 BTG1P62324 171 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 TGIF1Q15583 401 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 GPR139Q6DWJ6 353 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 SPINK14Q6IE38 97 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 EXD3Q8N9H8 876 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 OR51S1Q8NGJ8 323 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 RPS4Y2Q8TD47 263 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 DNASE2BQ8WZ79 361 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 FXYD6Q9H0Q3 95 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 MGAT4CQ9UBM8 478 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 DHDHQ9UQ10 334 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 AKAP6Q13023 2319 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 ATRXP46100 2492 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 KIAA2026Q5HYC2 2103 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 LOC107986453A0A1B0GWG9 222 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 A0A1W2PQD3 144 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 TNFSF11O14788 317 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 EIF4E2O60573 245 aaKnown RBP7.46□□□□□ -1.22
CD44-208ENST00000428726 RFPL3SP0C7P2 107 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 MMP15P51511 669 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 CLRN1P58418 232 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 SLC26A5P58743 744 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 TNK1Q13470 666 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 ZNF684Q5T5D7 378 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 SLC22A10Q63ZE4 541 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 CREB3L2Q70SY1 520 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 FAM57BQ71RH2 274 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 GRINAQ7Z429 371 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.22
CD44-208ENST00000428726 CDC20BQ86Y33 519 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 RELL2Q8NC24 303 aaPredicted RBP7.46□□□□□ -1.22
CD44-208ENST00000428726 OR52N4Q8NGI2 321 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 OR2AE1Q8NHA4 323 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 S100A16Q96FQ6 103 aaKnown RBP7.46□□□□□ -1.22
CD44-208ENST00000428726 GHITMQ9H3K2 345 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 HRASLSQ9HDD0 168 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 RABL2AQ9UBK7 228 aaPredicted RBP7.46□□□□□ -1.22
CD44-208ENST00000428726 RABL2BQ9UNT1 228 aa7.46□□□□□ -1.22
CD44-208ENST00000428726 PCDHGA9Q9Y5G4 932 aaKnown RBP7.46□□□□□ -1.22
CD44-208ENST00000428726 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 OR5H15A6NDH6 313 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 PYCARD-AS1I3L0S3 204 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 M0R233 179 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SULT2B1O00204 365 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 TO15178 435 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 RAF1P04049 648 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 DPP4P27487 766 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 LAP3P28838 519 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 TAS2R20P59543 309 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SLC17A1Q14916 467 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 GSG1Q2KHT4 349 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 C11orf88Q6PI97 169 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ZNF782Q6ZMW2 699 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 GALNTL5Q7Z4T8 443 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 C20orf196Q8IYI0 205 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 DND1Q8IYX4 353 aaKnown RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 ZNF101Q8IZC7 436 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 OR10H5Q8NGA6 315 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 OR4D6Q8NGJ1 314 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 OR6N1Q8NGY5 312 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 GPR148Q8TDV2 347 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 CASTOR1Q8WTX7 329 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ADAMTS14Q8WXS8 1223 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 NICN1Q9BSH3 213 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 TINAGL1Q9GZM7 467 aaPredicted RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 SLITRK2Q9H156 845 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 C20orf85Q9H1P6 137 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ZNF768Q9H5H4 540 aaKnown RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 SERINC1Q9NRX5 453 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ZNF581Q9P0T4 197 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 CAMK2AQ9UQM7 478 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 PKDREJQ9NTG1 2253 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 OTOGLQ3ZCN5 2332 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 A0A1B0GTQ1 180 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 FAM221AA4D161 298 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SPDEFO95238 335 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ABHD16AO95870 558 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 QDPRP09417 244 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 GNB3P16520 340 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 MAP2K6P52564 334 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 RIDAP52758 137 aaKnown RBP7.45□□□□□ -1.22
CD44-208ENST00000428726 AKR1C2P52895 323 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ART1P52961 327 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 PNLIPRP2P54317 469 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 GLO1Q04760 184 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 AKR1C1Q04828 323 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 BAMBIQ13145 260 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 UBE2NLQ5JXB2 153 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 FAM74A1Q5RGS3 127 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 PHYHD1Q5SRE7 291 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SLC18B1Q6NT16 456 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 SLC23A3Q6PIS1 610 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 NLRC3Q7RTR2 1065 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 KMT5CQ86Y97 462 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 MEIOBQ8N635 442 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 WDSUB1Q8N9V3 476 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 ZBTB44Q8NCP5 570 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 OR1J4Q8NGS1 313 aa7.45□□□□□ -1.22
CD44-208ENST00000428726 POC1BQ8TC44 478 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms