RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FBP2O00757 339 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 IFNA14P01570 189 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 MELTFP08582 738 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 DBHP09172 617 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 IFNA8P32881 189 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 RPL4P36578 427 aaKnown RBP15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 BPIFB3P59826 476 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 WDR25Q64LD2 544 aaPredicted RBP15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 NANOGP8Q6NSW7 305 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 FBXW12Q6X9E4 464 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 NRMQ8IXM6 262 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 TMEM86BQ8N661 226 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 PCYOX1LQ8NBM8 494 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 BHLHE23Q8NDY6 225 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 OR5L1Q8NGL2 311 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 OR13C2Q8NGS9 318 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 OR1F12Q8NHA8 337 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 TSPEARQ8WU66 669 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 FAM71F1Q96KD3 344 aaPredicted RBP15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 RBM4BQ9BQ04 359 aaKnown RBP15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 ECSITQ9BQ95 431 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 KIF17Q9P2E2 1029 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 ASH2LQ9UBL3 628 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 GRHPRQ9UBQ7 328 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 ADAM18Q9Y3Q7 739 aa15.25■□□□□ 0.03
UPK3BP1-201ENST00000428678 OR6C6A6NF89 314 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 EFCAB9A8MZ26 197 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 XKRYO14609 159 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 PHYHO14832 338 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 MLNRO43193 412 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 ENSAO43768 121 aaKnown RBP15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 IRF2P14316 349 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 SELEP16581 610 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 RGS6P49758 472 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 KRTAP10-3P60369 221 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 CYLC2Q14093 348 aaPredicted RBP15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 PDCD1Q15116 288 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 ZNF181Q2M3W8 571 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 LRRC23Q53EV4 343 aaPredicted RBP15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 CYBRD1Q53TN4 286 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 LYPD2Q6UXB3 125 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 ZNF620Q6ZNG0 422 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 CALHM3Q86XJ0 350 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 C1QL4Q86Z23 238 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 RASD2Q96D21 266 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 TPD52L3Q96J77 140 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 PRRC1Q96M27 445 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 RERGLQ9H628 205 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 A4GNTQ9UNA3 340 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 RNF114Q9Y508 228 aa15.24■□□□□ 0.03
UPK3BP1-201ENST00000428678 TEX13CA0A0J9YWL9 993 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 C22orf46C9J442 243 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 J3QW42 95 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 SFTPBP07988 381 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 CTLA4P16410 223 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 PMELP40967 661 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 FHL1Q13642 323 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 ANKDD1AQ495B1 522 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 CCDC92Q53HC0 331 aaPredicted RBP15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 MESTQ5EB52 335 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 ASPHD2Q6ICH7 369 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 DCDC5Q6ZRR9 648 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 C19orf18Q8NEA5 215 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 C10orf82Q8WW14 230 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 DYDC1Q8WWB3 177 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 SSMEM1Q8WWF3 244 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 Q96M85 177 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 TECTBQ96PL2 329 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 SH3GL1Q99961 368 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 RHCGQ9UBD6 479 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 POMT1Q9Y6A1 747 aa15.23■□□□□ 0.03
UPK3BP1-201ENST00000428678 PRSS37A4D1T9 235 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 P2RY10O00398 339 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 RER1O15258 196 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 FSTL3O95633 263 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 HLA-DPB1P04440 258 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 FUT4P22083 530 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 CFHR2P36980 270 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 YAP1P46937 504 aaKnown RBP15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 SLC9A3P48764 834 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 ERICH5Q6P6B1 374 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 APOBEC3DQ96AK3 386 aaPredicted RBP15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 ZNF570Q96NI8 536 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 MMADHCQ9H3L0 296 aaPredicted RBP15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 WDR76Q9H967 626 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 TMEM100Q9NV29 134 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 POLR1DQ9Y2S0 133 aa15.22■□□□□ 0.03
UPK3BP1-201ENST00000428678 IQCF6A8MYZ5 107 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TNFRSF13BO14836 293 aaPredicted RBP15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 AHCYL1O43865 530 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 SLC16A7O60669 478 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TOX4O94842 621 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 CD14P08571 375 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 FPR3P25089 353 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 LSM6P62312 80 aaKnown RBP15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 PRKCDQ05655 676 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TRAM2Q15035 370 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 TAF9Q16594 264 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 ZNF841Q6ZN19 808 aa15.21■□□□□ 0.03
UPK3BP1-201ENST00000428678 GLB1L2Q8IW92 636 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms