RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 SNX33Q8WV41 574 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 SPTSSAQ969W0 71 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 MS4A3Q96HJ5 214 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 AMELYQ99218 206 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 NIPAL2Q9H841 368 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 ERVK13-1Q9NX77 482 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 NPAP1Q9NZP6 1156 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 KLHDC2Q9Y2U9 406 aa13.39□□□□□ -0.27
COL11A1-204ENST00000427239 EXOSC1Q9Y3B2 195 aaKnown RBP13.39□□□□□ -0.27
COL11A1-204ENST00000427239 SULT1C4O75897 302 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 CRYAAP02489 173 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 APOC1P02654 83 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 CDK1P06493 297 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 H2BFMP0C1H6 154 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 CECR9P0C854 216 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 DCTDP32321 178 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 ACTA2P62736 377 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 ACTG2P63267 376 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 RNLSQ5VYX0 342 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 SP5Q6BEB4 398 aaPredicted RBP13.38□□□□□ -0.27
COL11A1-204ENST00000427239 LHFPL3Q86UP9 236 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 POM121L2Q96KW2 1035 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 PSMG3-AS1Q96PY0 264 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 OR8B4Q96RC9 309 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 KCNN3Q9UGI6 736 aa13.38□□□□□ -0.27
COL11A1-204ENST00000427239 LOC100509620A0A075B734 347 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 C5orf49A4QMS7 147 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 TACSTD2P09758 323 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
COL11A1-204ENST00000427239 CD40P25942 277 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 NR1H2P55055 460 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 GALK2Q01415 458 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF85Q03923 595 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 DAZAP2Q15038 168 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-204ENST00000427239 BEX5Q5H9J7 111 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 ARL9Q6T311 187 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 RADILQ96JH8 1075 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 DCLRE1CQ96SD1 692 aaKnown RBP13.37□□□□□ -0.27
COL11A1-204ENST00000427239 KCNJ15Q99712 375 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 KCNS3Q9BQ31 491 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 SLCO1C1Q9NYB5 712 aa13.37□□□□□ -0.27
COL11A1-204ENST00000427239 A1L4Q6 167 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 DPRXA6NFQ7 191 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 RGS10O43665 173 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 MRPS14O60783 128 aaKnown RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 GOSR1O95249 250 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 KRT8P05787 483 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CELA3BP08861 270 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 LIMS3P0CW19 117 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 LIMS4P0CW20 117 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF35P13682 527 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 HSD11B1P28845 292 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 C21orf33P30042 268 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 OTX1P32242 354 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CHN2P52757 468 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 TPTEP56180 551 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 GABARAPL2P60520 117 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 NAAAQ02083 359 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 RSPO1Q2MKA7 263 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 KRTAP27-1Q3LI81 207 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CDONQ4KMG0 1287 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 NCMAPQ5T1S8 102 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF684Q5T5D7 378 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 LRRN1Q6UXK5 716 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 UNQ6126/PRO20091Q6UXV3 157 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 SPATC1Q76KD6 591 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 PRSS48Q7RTY5 328 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 SYS1Q8N2H4 156 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 NR1H4Q96RI1 486 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CDCA4Q9BXL8 241 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 PAK1IP1Q9NWT1 392 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ETAA1Q9NY74 926 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 IKZF2Q9UKS7 526 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 METTL15A6NJ78 407 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 F5H5K5 113 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 TNFAIP8O95379 198 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CCNOP22674 350 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 PCSK6P29122 969 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ETV1P50549 477 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 RIDAP52758 137 aaKnown RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 MVKQ03426 396 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 BSPH1Q075Z2 132 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 TMPRSS11AQ6ZMR5 421 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 MYPOPQ86VE0 399 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 RFLNBQ8N5W9 214 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 PLPPR2Q96GM1 343 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ALG8Q9BVK2 526 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ELOVL3Q9HB03 270 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CDH20Q9HBT6 801 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 EIF3KQ9UBQ5 218 aaKnown RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 ERGIC3Q9Y282 383 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 CAB39Q9Y376 341 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-204ENST00000427239 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 LRP12Q9Y561 859 aa13.36□□□□□ -0.27
COL11A1-204ENST00000427239 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-204ENST00000427239 M0R135 149 aa13.35□□□□□ -0.27
COL11A1-204ENST00000427239 ICMTO60725 284 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms