RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TACSTD2P09758 323 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 IGFBP5P24593 272 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 EPHA2P29317 976 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 CENPAP49450 140 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 PPP1CBP62140 327 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 HIST1H3AP68431 136 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 ELF3P78545 371 aaPredicted RBP10.85□□□□□ -0.67
GPC1-204ENST00000426280 GINS1Q14691 196 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 NKPD1Q17RQ9 610 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 HIST2H3PS2Q5TEC6 136 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 KDM4DQ6B0I6 523 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 HIST2H3AQ71DI3 136 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 SYT9Q86SS6 491 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 NAA40Q86UY6 237 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 JAZF1Q86VZ6 243 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 GLB1L2Q8IW92 636 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 LNX2Q8N448 690 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 NPEPL1Q8NDH3 523 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 OR2T33Q8NG76 320 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 OSBPL10Q9BXB5 764 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 NARFLQ9H6Q4 476 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 MYOZ1Q9NP98 299 aaPredicted RBP10.85□□□□□ -0.67
GPC1-204ENST00000426280 RPRD1BQ9NQG5 326 aaKnown RBP10.85□□□□□ -0.67
GPC1-204ENST00000426280 KRT84Q9NSB2 600 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 ZNF275Q9NSD4 429 aaPredicted RBP10.85□□□□□ -0.67
GPC1-204ENST00000426280 DCAF16Q9NXF7 216 aa10.85□□□□□ -0.67
GPC1-204ENST00000426280 C5orf63A6NC05 138 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 OR6C6A6NF89 314 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 SGCEO43556 437 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 IDH3BO43837 385 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 DOK2O60496 412 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 ICMTO60725 284 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 RENP00797 406 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 NR2C1P13056 603 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 PYCR1P32322 319 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 POLR2IP36954 125 aaKnown RBP10.84□□□□□ -0.67
GPC1-204ENST00000426280 RPS27P42677 84 aaKnown RBP10.84□□□□□ -0.67
GPC1-204ENST00000426280 CRISP1P54107 249 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 PRSS12P56730 875 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 CDK5Q00535 292 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 PSG7Q13046 419 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 CRMP1Q14194 572 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 RCN1Q15293 331 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 AVPI1Q5T686 147 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
GPC1-204ENST00000426280 Q6ZR03 302 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 ADCK1Q86TW2 530 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 LINC00346Q8IVM7 164 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 SLC37A3Q8NCC5 494 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 SLC26A10Q8NG04 563 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 RDH5Q92781 318 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 SLC29A1Q99808 456 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 RACGAP1Q9H0H5 632 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 CHODLQ9H9P2 273 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 MSL2Q9HCI7 577 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 MRPL22Q9NWU5 206 aaKnown RBP10.84□□□□□ -0.67
GPC1-204ENST00000426280 PLEK2Q9NYT0 353 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 EIF3KQ9UBQ5 218 aaKnown RBP10.84□□□□□ -0.67
GPC1-204ENST00000426280 GRIP1Q9Y3R0 1128 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 NAV3Q8IVL0 2385 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 HIVEP2P31629 2446 aa10.84□□□□□ -0.67
GPC1-204ENST00000426280 LOC100289279A0A1B0GTE1 492 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 FAM183AA6NL82 134 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 FAM157AC9JC47 383 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 EI24O14681 340 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 SPRY3O43610 288 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 LMX1BO60663 402 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 COX5BP10606 129 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 CLUP10909 449 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 ANPEPP15144 967 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 GRK5P34947 590 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 GGT2P36268 569 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 GUCA1AP43080 201 aaPredicted RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 HTR5AP47898 357 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 PCBD1P61457 104 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 LSM6P62312 80 aaKnown RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 TEKQ02763 1124 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 SCRN3Q0VDG4 424 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 HLXQ14774 488 aaPredicted RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 PTGES3Q15185 160 aaKnown RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 ZNF718Q3SXZ3 478 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 SLC27A4Q6P1M0 643 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 CFAP77Q6ZQR2 320 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 ZBTB46Q86UZ6 589 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 ALDH16A1Q8IZ83 802 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 PARP8Q8N3A8 854 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 CBR4Q8N4T8 237 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 OR51L1Q8NGJ5 315 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 OR10S1Q8NGN2 331 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 OR9Q1Q8NGQ5 310 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 OR1F12Q8NHA8 337 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 CMBLQ96DG6 245 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 MED20Q9H944 212 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 PNRC2Q9NPJ4 139 aaKnown RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 SLCO1C1Q9NYB5 712 aa10.83□□□□□ -0.68
GPC1-204ENST00000426280 FBXO9Q9UK97 447 aaPredicted RBP10.83□□□□□ -0.68
GPC1-204ENST00000426280 BAIAP2Q9UQB8 552 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms