RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SHISA6Q6ZSJ9 500 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ACOT7LQ6ZUV0 252 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 OR1S2Q8NGQ3 325 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 LMX1AQ8TE12 382 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ADAMTS18Q8TE60 1221 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 SPACA5Q96QH8 159 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 TSNAXQ99598 290 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 LRRC61Q9BV99 259 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 NKX6-2Q9C056 277 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 CNTD2Q9H8S5 307 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PDE7BQ9NP56 450 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 MBD2Q9UBB5 411 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 EYSQ5T1H1 3165 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 EPOPA6NHQ4 379 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 HSPB2A8KAH6 182 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 EIF4E2O60573 245 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 STK17BO94768 372 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PMP2P02689 132 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 H2BFMP0C1H6 154 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 GNB3P16520 340 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 HRH1P35367 487 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ROM1Q03395 351 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 DLX2Q07687 328 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 HSPB2Q16082 182 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PAN3Q58A45 887 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 MOB3CQ70IA8 216 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ARMC10Q8N2F6 343 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ADAD2Q8NCV1 583 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PAQR8Q8TEZ7 354 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 THAP3Q8WTV1 239 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ADAT1Q9BUB4 502 aaKnown RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 SLCO5A1Q9H2Y9 848 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 GAREM1Q9H706 876 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 GDF2Q9UK05 429 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PCDHB10Q9UN67 800 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 R4GMQ9 66 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 KIF26BQ2KJY2 2108 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 C9orf170A2RU37 121 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 BLACEA4D250 179 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 RNF222A6NCQ9 220 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 FRG2CA6NGY1 282 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 H0YIG0 161 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 GPR31O00270 319 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 CD8AP01732 235 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 GP1BAP07359 652 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 BDKRB2P30411 391 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ARL4DP49703 201 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 DMRTC1Q5HYR2 192 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 C1orf189Q5VU69 101 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 LYG2Q86SG7 212 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 RTN4RL2Q86UN3 420 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 FAM219AQ8IW50 185 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 CLRN3Q8NCR9 226 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 OR52N4Q8NGI2 321 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF519Q8TB69 540 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 ADIPOR1Q96A54 375 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PHB2Q99623 299 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PRRT1Q99946 306 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 EMC6Q9BV81 110 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC6A15Q9H2J7 730 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 PTGES2Q9H7Z7 377 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 LANCL2Q9NS86 450 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 MED29Q9NX70 200 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 MKL2Q9ULH7 1088 aa6.74□□□□□ -1.33
SMARCC1-202ENST00000425518 A0A1B0GTI1 187 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 A8MVM7 634 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 PLPP3O14495 311 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF208O43345 1280 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 WDPCPO95876 746 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 IGFBP3P17936 291 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ZBTB25P24278 435 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CRABP1P29762 137 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CASRP41180 1078 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 BLKP51451 505 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 PPIAP62937 165 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 MEF2DQ14814 521 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 COX15Q7KZN9 410 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 COMMD2Q86X83 199 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ZNF101Q8IZC7 436 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 GTPBP8Q8N3Z3 284 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 OR13C9Q8NGT0 318 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CUTCQ9NTM9 273 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 ASXL3Q9C0F0 2248 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 WDR87Q6ZQQ6 2873 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 WIPF3A6NGB9 483 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 NPIPA5E9PKD4 350 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 RAB27BO00194 218 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 DDAH2O95865 285 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 MT-ATP6P00846 226 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 OPN1LWP04000 364 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CD74P04233 296 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 PGAM2P15259 253 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 EN2P19622 333 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CAPZBP47756 277 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 POLR2HP52434 150 aaKnown RBP6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 HYAL1Q12794 435 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 SLC25A42Q86VD7 318 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 C9orf40Q8IXQ3 194 aa6.73□□□□□ -1.33
SMARCC1-202ENST00000425518 CCDC36Q8IYA8 594 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms