RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RADILQ96JH8 1075 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 KCNK17Q96T54 332 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 G6PC2Q9NQR9 355 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 PLA2G3Q9NZ20 509 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 NPAP1Q9NZP6 1156 aa10.6□□□□□ -0.71
PTPRN-204ENST00000423636 GDF2Q9UK05 429 aaPredicted RBP10.6□□□□□ -0.71
PTPRN-204ENST00000423636 CEP295Q9C0D2 2601 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 A0A1W2PQD3 144 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 ZNF726A6NNF4 738 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 KLF7O75840 302 aaPredicted RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 POU3F2P20265 443 aaPredicted RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 RBMXP38159 391 aaKnown RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 TSPAN5P62079 268 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 PCOLCEQ15113 449 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 DCAF12L2Q5VW00 463 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 BOLLQ8N9W6 283 aaKnown RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 TMEM104Q8NE00 496 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 MCHR2Q969V1 340 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 ZC3HAV1LQ96H79 300 aaKnown RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 ALKBH3Q96Q83 286 aaPredicted RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 SELENOIQ9C0D9 397 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 CKLFQ9UBR5 152 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 NUBP2Q9Y5Y2 271 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 LHFPL6Q9Y693 200 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 CHCHD2Q9Y6H1 151 aaPredicted RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 KALRNO60229 2985 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 GABARAPH6UMI1 98 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 GLSO94925 669 aaPredicted RBP10.59□□□□□ -0.71
PTPRN-204ENST00000423636 CD2P06729 351 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 CRABP1P29762 137 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 EGR3Q06889 387 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 RASGEF1BQ0VAM2 473 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 C3AR1Q16581 482 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 C1QTNF12Q5T7M4 302 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 ATP1A1-AS1Q5TC04 95 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 CATSPERDQ86XM0 798 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 OR2M3Q8NG83 312 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 GPER1Q99527 375 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 STMN3Q9NZ72 180 aa10.59□□□□□ -0.71
PTPRN-204ENST00000423636 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 NSG1A0A0A6YYJ2 146 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 C1QBP02746 253 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 TTRP02766 147 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 CD53P19397 219 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 MAPK3P27361 379 aaPredicted RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF121P58317 390 aaPredicted RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 RIN1Q13671 783 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 EMC4Q5J8M3 183 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 WIPI1Q5MNZ9 446 aaPredicted RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 KLHL24Q6TFL4 600 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 C1orf210Q8IVY1 113 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 C9orf62Q8N4C0 152 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 OR5L2Q8NGL0 311 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 OR1J2Q8NGS2 313 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 CASTOR1Q8WTX7 329 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 PBOV1Q9GZY1 135 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 FXYD6Q9H0Q3 95 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 EXO5Q9H790 373 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 GPR84Q9NQS5 396 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF581Q9P0T4 197 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 HHLA2Q9UM44 414 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 IGHV3-64DA0A0J9YX35 117 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 GOSR2O14653 212 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 SIGLEC5O15389 551 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 PEX14O75381 377 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 AMY2AP04746 511 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ANXA3P12429 323 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 CCNOP22674 350 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 PSMA6P60900 246 aaKnown RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 SIGLEC14Q08ET2 396 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 PMPCAQ10713 525 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 BAMBIQ13145 260 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ZMYND11Q15326 602 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 LGALSLQ3ZCW2 172 aaPredicted RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 LINC00696Q6ZRV3 163 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 BTN2A1Q7KYR7 527 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 TIPARPQ7Z3E1 657 aaKnown RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 AGBL5Q8NDL9 886 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ZFAND1Q8TCF1 268 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ZNF416Q9BWM5 594 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 OR51B6Q9H340 312 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 DKKL1Q9UK85 242 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 TRBV5-7A0A0A0MS05 114 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 A0A1W2PPC1 479 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 OR2M5A3KFT3 312 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ARPC5O15511 151 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 MPIG6BO95866 241 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 CCL2P13500 99 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 NTF4P34130 210 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 PRSS3P35030 304 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 APOBEC1P41238 236 aaKnown RBP10.58□□□□□ -0.72
PTPRN-204ENST00000423636 OR3A4PP47883 348 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 IGFBP7Q16270 282 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 RHOUQ7L0Q8 258 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 KCTD20Q7Z5Y7 419 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 ANGPTL5Q86XS5 388 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 OR2AJ1Q8NGZ0 328 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 PIGTQ969N2 578 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 DIABLOQ9NR28 239 aa10.58□□□□□ -0.72
PTPRN-204ENST00000423636 HPF1Q9NWY4 346 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms