RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 PCDHGB5Q9Y5G0 923 aa15.19■□□□□ 0.02
LINC00271-201ENST00000421378 F5H5K5 113 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 DBHP09172 617 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 OPRL1P41146 370 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 GRB2P62993 217 aaKnown RBP15.18■□□□□ 0.02
LINC00271-201ENST00000421378 LRRN1Q6UXK5 716 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 KRT77Q7Z794 578 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 SPTSSAQ969W0 71 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 MROQ9BYG7 248 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 CNOT2Q9NZN8 540 aaKnown RBP15.18■□□□□ 0.02
LINC00271-201ENST00000421378 POU2F3Q9UKI9 436 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 CADP27708 2225 aa15.18■□□□□ 0.02
LINC00271-201ENST00000421378 HEATR1Q9H583 2144 aaKnown RBP15.17■□□□□ 0.02
LINC00271-201ENST00000421378 DAPL1A0PJW8 107 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 FAM221AA4D161 298 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 EFCAB10A6NFE3 127 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 PSMD9O00233 223 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 CTAG2O75638 210 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 IGHA1P01876 353 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 H2BFMP0C1H6 154 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 PIPP12273 146 aaPredicted RBP15.17■□□□□ 0.02
LINC00271-201ENST00000421378 HSD11B1P28845 292 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 OTX1P32242 354 aaPredicted RBP15.17■□□□□ 0.02
LINC00271-201ENST00000421378 ROM1Q03395 351 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 EGR3Q06889 387 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 HIST2H2BCQ6DN03 193 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 AHSA2Q719I0 299 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 SSX6Q7RTT6 188 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.17■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF679Q8IYX0 411 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF786Q8N393 782 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF540Q8NDQ6 660 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 KBTBD8Q8NFY9 601 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 GGHQ92820 318 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 MARVELD3Q96A59 401 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 OR8B4Q96RC9 309 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 TMEM204Q9BSN7 226 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 SCN3BQ9NY72 215 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 UBAP1Q9NZ09 502 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 PSORS1C1Q9UIG5 152 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 IKZF2Q9UKS7 526 aa15.17■□□□□ 0.02
LINC00271-201ENST00000421378 PRR32B1ATL7 298 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 SHISA9B4DS77 424 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 M0R135 149 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 ABHD16AO95870 558 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 CCDC159P0C7I6 412 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 DCKP27707 260 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 KRTAP27-1Q3LI81 207 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 DEGS2Q6QHC5 323 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 ARL9Q6T311 187 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF704Q6ZNC4 412 aaPredicted RBP15.16■□□□□ 0.02
LINC00271-201ENST00000421378 SNX33Q8WV41 574 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 IPCEF1Q8WWN9 437 aaPredicted RBP15.16■□□□□ 0.02
LINC00271-201ENST00000421378 C14orf79Q96F83 325 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF799Q96GE5 643 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 C4orf45Q96LM5 186 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 DCLRE1CQ96SD1 692 aaKnown RBP15.16■□□□□ 0.02
LINC00271-201ENST00000421378 KCNJ15Q99712 375 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 FGF20Q9NP95 211 aaPredicted RBP15.16■□□□□ 0.02
LINC00271-201ENST00000421378 INPP5EQ9NRR6 644 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 SLCO1C1Q9NYB5 712 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 EIF3KQ9UBQ5 218 aaKnown RBP15.16■□□□□ 0.02
LINC00271-201ENST00000421378 GRIP1Q9Y3R0 1128 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 SPEF1Q9Y4P9 236 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 LRP12Q9Y561 859 aa15.16■□□□□ 0.02
LINC00271-201ENST00000421378 ICMTO60725 284 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 PLAUP00749 431 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 FAM157BP0CG42 384 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 PCSK6P29122 969 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 WNT5AP41221 380 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 SLC6A9P48067 706 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 TPTEP56180 551 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF85Q03923 595 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 HGFACQ04756 655 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ST3GAL4Q11206 333 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 RSPO1Q2MKA7 263 aaPredicted RBP15.15■□□□□ 0.02
LINC00271-201ENST00000421378 UNQ6126/PRO20091Q6UXV3 157 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF101Q8IZC7 436 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF295-AS1Q8N0V1 137 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 CLEC4MQ9H2X3 399 aaPredicted RBP15.15■□□□□ 0.02
LINC00271-201ENST00000421378 OR51B6Q9H340 312 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 NIPAL2Q9H841 368 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ELOVL3Q9HB03 270 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 DIMT1Q9UNQ2 313 aaKnown RBP15.15■□□□□ 0.02
LINC00271-201ENST00000421378 TPRKBQ9Y3C4 175 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 LRRC42Q9Y546 428 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 RTTNQ86VV8 2226 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ABCA4P78363 2273 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 PTGES3LE9PB15 166 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 SMPD2O60906 423 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ZNF254O75437 659 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 KRT8P05787 483 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ACSM4P0C7M7 580 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 MYL12AP19105 171 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 NR4A1P22736 598 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 CRHBPP24387 322 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 CX3CR1P49238 355 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 PRKXP51817 358 aa15.15■□□□□ 0.02
LINC00271-201ENST00000421378 RIDAP52758 137 aaKnown RBP15.15■□□□□ 0.02
LINC00271-201ENST00000421378 ACTA2P62736 377 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms