RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZNF620Q6ZNG0 422 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 COLCA1Q6ZS62 124 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 ZBTB46Q86UZ6 589 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 DEFB107AQ8IZN7 70 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 ZNF283Q8N7M2 679 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 SEMA6DQ8NFY4 1073 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 OR4K13Q8NH42 304 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 RAB1CQ92928 201 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 DDOQ99489 341 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 BTBD10Q9BSF8 475 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 EGLN1Q9GZT9 426 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 FN3KQ9H479 309 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 METTL17Q9H7H0 456 aaPredicted RBP9.32□□□□□ -0.92
SSBP3-206ENST00000420121 PNRC2Q9NPJ4 139 aaKnown RBP9.32□□□□□ -0.92
SSBP3-206ENST00000420121 TUBG2Q9NRH3 451 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 LYVE1Q9Y5Y7 322 aa9.32□□□□□ -0.92
SSBP3-206ENST00000420121 LOC105371242A0A075B767 164 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 A0A1B0GWJ7 208 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 TCRBV5S2A0A599 114 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 J3QW42 95 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 TCF21O43680 179 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 OR10H3O60404 316 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 GMNNO75496 209 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 VENTXO95231 258 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 FSHBP01225 129 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 PSKH1P11801 424 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 RAC2P15153 192 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ANOS1P23352 680 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 CRABP1P29762 137 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 GGT2P36268 569 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 MAGEA2P43356 314 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 TSPAN31Q12999 210 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 HLXQ14774 488 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 SPATS1Q496A3 300 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ZMAT1Q5H9K5 638 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ZNF362Q5T0B9 420 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ZNF770Q6IQ21 691 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 SLC18B1Q6NT16 456 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 CFAP77Q6ZQR2 320 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ZDHHC21Q8IVQ6 265 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 FITM2Q8N6M3 262 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 SDR9C7Q8NEX9 313 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 OR4C15Q8NGM1 316 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 OR8D4Q8NGM9 314 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ITLN1Q8WWA0 313 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 ZNRF4Q8WWF5 429 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 PTP4A1Q93096 173 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 RAB39BQ96DA2 213 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 TIMD4Q96H15 378 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 DCLRE1CQ96SD1 692 aaKnown RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 COQ7Q99807 217 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 PLA2G12AQ9BZM1 189 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 SRA1Q9HD15 236 aaKnown RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 KRCC1Q9NPI7 259 aaPredicted RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 RPRD1BQ9NQG5 326 aaKnown RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 TMEM106BQ9NUM4 274 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 MRPL22Q9NWU5 206 aaKnown RBP9.31□□□□□ -0.92
SSBP3-206ENST00000420121 VNN3Q9NY84 501 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 OPN4Q9UHM6 478 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 NPTNQ9Y639 398 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 NBEAL1Q6ZS30 2694 aa9.31□□□□□ -0.92
SSBP3-206ENST00000420121 BHLHE40O14503 412 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 MLNRO43193 412 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 DCTN3O75935 186 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 ANPEPP15144 967 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 ZFP36P26651 326 aaKnown RBP9.3□□□□□ -0.92
SSBP3-206ENST00000420121 RGS6P49758 472 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 SLC3A1Q07837 685 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 ZMYND11Q15326 602 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 LIPNQ5VXI9 398 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 OR2T2Q6IF00 324 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 FAHD2BQ6P2I3 314 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-206ENST00000420121 PGM2L1Q6PCE3 622 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 DNM1P34Q6PK57 102 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 BRICD5Q6PL45 260 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 C16orf89Q6UX73 402 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 CYP2R1Q6VVX0 501 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 ZNF771Q7L3S4 317 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-206ENST00000420121 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.3□□□□□ -0.92
SSBP3-206ENST00000420121 LINC00346Q8IVM7 164 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 OR5AS1Q8N127 324 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 GJC3Q8NFK1 279 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 OR2Z1Q8NG97 314 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 OR9Q2Q8NGE9 314 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 OR10S1Q8NGN2 331 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 GNPDA2Q8TDQ7 276 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 MCUR1Q96AQ8 359 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 FAHD2AQ96GK7 314 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 GAL3ST1Q99999 423 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 IFT27Q9BW83 186 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 HDHD2Q9H0R4 259 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 PTTG3PQ9NZH4 202 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 ACTR3BQ9P1U1 418 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 IL19Q9UHD0 177 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 CYB5R1Q9UHQ9 305 aa9.3□□□□□ -0.92
SSBP3-206ENST00000420121 F5H0A9 414 aaPredicted RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 H0YL77 283 aa9.29□□□□□ -0.92
SSBP3-206ENST00000420121 RRP9O43818 475 aaKnown RBP9.29□□□□□ -0.92
SSBP3-206ENST00000420121 IDH3BO43837 385 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms