RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CHODLQ9H9P2 273 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 ELOVL3Q9HB03 270 aa17.54■□□□□ 0.4
PKNOX1-202ENST00000418336 WNT9BO14905 357 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 ZNF16P17020 682 aaPredicted RBP17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 HOXB6P17509 224 aaKnown RBP17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 KITLGP21583 273 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 SLC25A1P53007 311 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 CCL8P80075 99 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 CBX1P83916 185 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 SLC36A3Q495N2 470 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 SPATA24Q86W54 205 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 IQCF1Q8N6M8 205 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 ZNF540Q8NDQ6 660 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 OR2T33Q8NG76 320 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 OR9Q1Q8NGQ5 310 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 DCLRE1CQ96SD1 692 aaKnown RBP17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 HDHD2Q9H0R4 259 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 YAE1D1Q9NRH1 226 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 CMC2Q9NRP2 79 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 PDP1Q9P0J1 537 aaPredicted RBP17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 BAIAP2Q9UQB8 552 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 CACNG2Q9Y698 323 aa17.53■□□□□ 0.4
PKNOX1-202ENST00000418336 TANC2Q9HCD6 1990 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 J3QW42 95 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 SPI1P17947 270 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 PRKACGP22612 351 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 TUBG1P23258 451 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 RPS27P42677 84 aaKnown RBP17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 CRYBB2P43320 205 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 CENPAP49450 140 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 ZNF81P51508 661 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 SELENOVP59797 346 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 HNRNPA0Q13151 305 aaKnown RBP17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 PCGF3Q3KNV8 242 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 UNQ6126/PRO20091Q6UXV3 157 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 OR51L1Q8NGJ5 315 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 PTP4A1Q93096 173 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 HAVCR1Q96D42 359 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 WDR76Q9H967 626 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 TUBG2Q9NRH3 451 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 DNAJB9Q9UBS3 223 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 GRIP1Q9Y3R0 1128 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 COMMD3-BMI1R4GMX3 469 aa17.52■□□□□ 0.4
PKNOX1-202ENST00000418336 TVP23AA6NH52 213 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 GYPBP06028 91 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 CD55P08174 381 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 ACSM4P0C7M7 580 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 GCH1P30793 250 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 OTX1P32242 354 aaPredicted RBP17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 ARHGDIAP52565 204 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 CDK5R2Q13319 367 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 MOGQ16653 247 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 CYB5R2Q6BCY4 276 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 ACSM5Q6NUN0 579 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 TMEM154Q6P9G4 183 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 ARL9Q6T311 187 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 FBXW12Q6X9E4 464 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 HIPK1Q86Z02 1210 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 OR2T4Q8NH00 348 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 C1QTNF5Q9BXJ0 243 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 TMEM160Q9NX00 188 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 GPR160Q9UJ42 338 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 KCNG2Q9UJ96 466 aa17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 PURGQ9UJV8 347 aaKnown RBP17.51■□□□□ 0.39
PKNOX1-202ENST00000418336 A8MV72 311 aaPredicted RBP17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 GRK5P34947 590 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 RBMXP38159 391 aaKnown RBP17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 CCNIQ14094 377 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 FAM209AQ5JX71 171 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 ASRGL1Q7L266 308 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 NAA40Q86UY6 237 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 PROKR2Q8NFJ6 384 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 SNX33Q8WV41 574 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 HPS1Q92902 700 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 CMBLQ96DG6 245 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 DUS3LQ96G46 650 aaKnown RBP17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 MSL2Q9HCI7 577 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 DDX28Q9NUL7 540 aaKnown RBP17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 POLR1DQ9Y2S0 133 aa17.5■□□□□ 0.39
PKNOX1-202ENST00000418336 A0A1B0GWJ7 208 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 SPRY3O43610 288 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 IGFBP5P24593 272 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 RGS6P49758 472 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 GZMKP49863 264 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 TMEM33P57088 247 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 PPP2R2BQ00005 443 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 CDK5Q00535 292 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 HLXQ14774 488 aaPredicted RBP17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 TSTQ16762 297 aaKnown RBP17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 TEX30Q5JUR7 227 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 FAHD1Q6P587 224 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 SHQ1Q6PI26 577 aaKnown RBP17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 ZNF511Q8NB15 262 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 CLDND2Q8NHS1 167 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 ST7LQ8TDW4 575 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 MARCH7Q9H992 704 aa17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 CGGBP1Q9UFW8 167 aaPredicted RBP17.49■□□□□ 0.39
PKNOX1-202ENST00000418336 IGHV1-69-2A0A0G2JMI3 117 aa17.48■□□□□ 0.39
PKNOX1-202ENST00000418336 C5orf63A6NC05 138 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms