RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 ING1Q9UK53 422 aaPredicted RBP8.81□□□□□ -1
DDB1-202ENST00000414411 ZNF175Q9Y473 711 aa8.81□□□□□ -1
DDB1-202ENST00000414411 INTS1Q8N201 2190 aaKnown RBP8.81□□□□□ -1
DDB1-202ENST00000414411 IGHV3-15A0A0B4J1V0 119 aa8.8□□□□□ -1
DDB1-202ENST00000414411 FAM25EA8MYX2 175 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PRR32B1ATL7 298 aa8.8□□□□□ -1
DDB1-202ENST00000414411 GPRIN2O60269 458 aa8.8□□□□□ -1
DDB1-202ENST00000414411 CYTIPO60759 359 aa8.8□□□□□ -1
DDB1-202ENST00000414411 WDR1O75083 606 aa8.8□□□□□ -1
DDB1-202ENST00000414411 AQP8O94778 261 aa8.8□□□□□ -1
DDB1-202ENST00000414411 VAMP5O95183 116 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PRB1P04280 392 aa8.8□□□□□ -1
DDB1-202ENST00000414411 TPOP07202 933 aa8.8□□□□□ -1
DDB1-202ENST00000414411 HOXD4P09016 255 aaPredicted RBP8.8□□□□□ -1
DDB1-202ENST00000414411 EPXP11678 715 aa8.8□□□□□ -1
DDB1-202ENST00000414411 GABRA1P14867 456 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ABOP16442 354 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ATF1P18846 271 aa8.8□□□□□ -1
DDB1-202ENST00000414411 HLA-DMAP28067 261 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PTGER4P35408 488 aa8.8□□□□□ -1
DDB1-202ENST00000414411 CTXN1P60606 82 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RPL18Q07020 188 aaKnown RBP8.8□□□□□ -1
DDB1-202ENST00000414411 SLC17A1Q14916 467 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ACSF3Q4G176 576 aaPredicted RBP8.8□□□□□ -1
DDB1-202ENST00000414411 CEP78Q5JTW2 689 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ZNF684Q5T5D7 378 aa8.8□□□□□ -1
DDB1-202ENST00000414411 NSUN5P2Q63ZY6 315 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ZNF57Q68EA5 555 aaPredicted RBP8.8□□□□□ -1
DDB1-202ENST00000414411 CHMP1BQ7LBR1 199 aa8.8□□□□□ -1
DDB1-202ENST00000414411 NANOGNBQ7Z5D8 188 aa8.8□□□□□ -1
DDB1-202ENST00000414411 CD163Q86VB7 1156 aa8.8□□□□□ -1
DDB1-202ENST00000414411 KDM8Q8N371 416 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RNF128Q8TEB7 428 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RFT1Q96AA3 541 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ANAPC16Q96DE5 110 aa8.8□□□□□ -1
DDB1-202ENST00000414411 OR14A2Q96R54 314 aa8.8□□□□□ -1
DDB1-202ENST00000414411 SNX18Q96RF0 628 aa8.8□□□□□ -1
DDB1-202ENST00000414411 CITED4Q96RK1 184 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PDCD1LG2Q9BQ51 273 aa8.8□□□□□ -1
DDB1-202ENST00000414411 MARVELD1Q9BSK0 173 aa8.8□□□□□ -1
DDB1-202ENST00000414411 NAA11Q9BSU3 229 aaPredicted RBP8.8□□□□□ -1
DDB1-202ENST00000414411 HDHD2Q9H0R4 259 aa8.8□□□□□ -1
DDB1-202ENST00000414411 DDX28Q9NUL7 540 aaKnown RBP8.8□□□□□ -1
DDB1-202ENST00000414411 NLKQ9UBE8 527 aa8.8□□□□□ -1
DDB1-202ENST00000414411 NUFIP1Q9UHK0 495 aaKnown RBP8.8□□□□□ -1
DDB1-202ENST00000414411 MCTS1Q9ULC4 181 aaKnown RBP8.8□□□□□ -1
DDB1-202ENST00000414411 MOKQ9UQ07 419 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RBMX2Q9Y388 322 aaKnown RBP8.8□□□□□ -1
DDB1-202ENST00000414411 FAM215AQ9Y5M1 114 aa8.8□□□□□ -1
DDB1-202ENST00000414411 FREM1Q5H8C1 2179 aa8.8□□□□□ -1
DDB1-202ENST00000414411 FLNCQ14315 2725 aa8.8□□□□□ -1
DDB1-202ENST00000414411 A0A1W2PNV4 684 aa8.8□□□□□ -1
DDB1-202ENST00000414411 A0A1W2PPK0 400 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ZNF716A6NP11 495 aa8.8□□□□□ -1
DDB1-202ENST00000414411 FAM171A2A8MVW0 826 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PRRG2O14669 202 aa8.8□□□□□ -1
DDB1-202ENST00000414411 LANCL1O43813 399 aa8.8□□□□□ -1
DDB1-202ENST00000414411 F13BP05160 661 aa8.8□□□□□ -1
DDB1-202ENST00000414411 HLA-DOBP13765 273 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PSMB10P40306 273 aa8.8□□□□□ -1
DDB1-202ENST00000414411 IFITM2Q01629 132 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RBPJQ06330 500 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PUDPQ08623 228 aa8.8□□□□□ -1
DDB1-202ENST00000414411 POU4F3Q15319 338 aa8.8□□□□□ -1
DDB1-202ENST00000414411 SF3B4Q15427 424 aaKnown RBP eCLIP8.8□□□□□ -17e-7■□□□□ 10.9
DDB1-202ENST00000414411 HSD17B12Q53GQ0 312 aa8.8□□□□□ -1
DDB1-202ENST00000414411 MESTQ5EB52 335 aa8.8□□□□□ -1
DDB1-202ENST00000414411 TMEM225Q6GV28 225 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ABLIM2Q6H8Q1 611 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PYHIN1Q6K0P9 492 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ZNF585AQ6P3V2 769 aa8.8□□□□□ -1
DDB1-202ENST00000414411 UNQ9370/PRO34162Q6UXP9 181 aa8.8□□□□□ -1
DDB1-202ENST00000414411 SEM1Q6ZVN7 128 aa8.8□□□□□ -1
DDB1-202ENST00000414411 FCRLAQ7L513 359 aa8.8□□□□□ -1
DDB1-202ENST00000414411 SLC16A9Q7RTY1 509 aa8.8□□□□□ -1
DDB1-202ENST00000414411 SYT9Q86SS6 491 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ZNF511Q8NB15 262 aa8.8□□□□□ -1
DDB1-202ENST00000414411 OR5H6Q8NGV6 325 aa8.8□□□□□ -1
DDB1-202ENST00000414411 UBASH3BQ8TF42 649 aa8.8□□□□□ -1
DDB1-202ENST00000414411 CAPSLQ8WWF8 208 aa8.8□□□□□ -1
DDB1-202ENST00000414411 PHYHIPQ92561 330 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
DDB1-202ENST00000414411 OXGR1Q96P68 337 aa8.8□□□□□ -1
DDB1-202ENST00000414411 TSSK2Q96PF2 358 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ABHD1Q96SE0 405 aa8.8□□□□□ -1
DDB1-202ENST00000414411 THAP7Q9BT49 309 aaPredicted RBP8.8□□□□□ -1
DDB1-202ENST00000414411 SF3B5Q9BWJ5 86 aaKnown RBP8.8□□□□□ -1
DDB1-202ENST00000414411 NDEL1Q9GZM8 345 aa8.8□□□□□ -1
DDB1-202ENST00000414411 RNF122Q9H9V4 155 aa8.8□□□□□ -1
DDB1-202ENST00000414411 ABRACLQ9P1F3 81 aa8.8□□□□□ -1
DDB1-202ENST00000414411 MYO18BQ8IUG5 2567 aa8.8□□□□□ -1
DDB1-202ENST00000414411 IGKV3D-15A0A087WSY6 115 aa8.79□□□□□ -1
DDB1-202ENST00000414411 ANKRD61A6NGH8 418 aa8.79□□□□□ -1
DDB1-202ENST00000414411 A6NIN4 97 aa8.79□□□□□ -1
DDB1-202ENST00000414411 SLC22A20A6NK97 555 aa8.79□□□□□ -1
DDB1-202ENST00000414411 FIGNL2A6NMB9 653 aa8.79□□□□□ -1
DDB1-202ENST00000414411 ZNF879B4DU55 563 aa8.79□□□□□ -1
DDB1-202ENST00000414411 RGS13O14921 159 aa8.79□□□□□ -1
DDB1-202ENST00000414411 SLC43A1O75387 559 aa8.79□□□□□ -1
DDB1-202ENST00000414411 SYNGR4O95473 234 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms