RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TBX5Q99593 518 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 GRIP1Q9Y3R0 1128 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 HSPE1-MOB4S4R3N1 261 aa26.41■■□□□ 1.82
CSNK1E-206ENST00000413574 DBTP11182 482 aaKnown RBP26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 NR4A1P22736 598 aa26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 CDK5R2Q13319 367 aa26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 SNTB2Q13425 540 aaKnown RBP26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 LAIR2Q6ISS4 152 aa26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 RNF133Q8WVZ7 376 aa26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 DDX28Q9NUL7 540 aaKnown RBP26.4■■□□□ 1.82
CSNK1E-206ENST00000413574 PRR32B1ATL7 298 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 F5H5K5 113 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 GPRIN2O60269 458 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 NKX6-1P78426 367 aaPredicted RBP26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 THAP5Q7Z6K1 395 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 COPS4Q9BT78 406 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 LIME1Q9H400 295 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 ATPIF1Q9UII2 106 aa26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 SETXQ7Z333 2677 aaKnown RBP26.39■■□□□ 1.82
CSNK1E-206ENST00000413574 SNTNA6NMZ2 147 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 ZNF878C9JN71 531 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 PSMD9O00233 223 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 HSPA13P48723 471 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 POU4F2Q12837 409 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 KRTAP27-1Q3LI81 207 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 NAA40Q86UY6 237 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 LGALS12Q96DT0 336 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 C4orf45Q96LM5 186 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 CA10Q9NS85 328 aa26.39■■□□□ 1.81
CSNK1E-206ENST00000413574 HS3ST1O14792 307 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 NGFP01138 241 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 UCP2P55851 309 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 CXCR4P61073 352 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 ECH1Q13011 328 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 TAF13Q15543 124 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 OR10H4Q8NGA5 316 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 FBLIM1Q8WUP2 373 aa26.38■■□□□ 1.81
CSNK1E-206ENST00000413574 MAGEB4O15481 346 aaPredicted RBP26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 THBS4P35443 961 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 ERVS71-1P61550 626 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 LRRN1Q6UXK5 716 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 RFPL4BQ6ZWI9 263 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 SSX6Q7RTT6 188 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 NUP37Q8NFH4 326 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 ZNF184Q99676 751 aaPredicted RBP26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 ANKRD60Q9BZ19 345 aa26.37■■□□□ 1.81
CSNK1E-206ENST00000413574 SMPD2O60906 423 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 ABHD16AO95870 558 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 OPRL1P41146 370 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 PRKXP51817 358 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 FBXW5Q969U6 566 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 RHNO1Q9BSD3 238 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 SLCO1C1Q9NYB5 712 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 EIF3KQ9UBQ5 218 aaKnown RBP26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 RPL36Q9Y3U8 105 aaKnown RBP26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 SPEF1Q9Y4P9 236 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 TMEM14AQ9Y6G1 99 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 POLQO75417 2590 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 A0A1W2PQL4 384 aaPredicted RBP26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 ACSM4P0C7M7 580 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 PCSK6P29122 969 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 MSMPQ1L6U9 139 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 ABHD4Q8TB40 342 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 EXOGQ9Y2C4 368 aaKnown RBP26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 MYRFQ9Y2G1 1151 aa26.36■■□□□ 1.81
CSNK1E-206ENST00000413574 DSCAMO60469 2012 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 ZNF670-ZNF695F2Z2N8 137 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 J3QRE1 110 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 H2BFMP0C1H6 154 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 OR2T7P0C7T2 308 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 ANOS1P23352 680 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 MYF6P23409 242 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 OR2T27Q8NH04 317 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 TMEM171Q8WVE6 324 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 SPTSSAQ969W0 71 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 KCNJ15Q99712 375 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 RAB26Q9ULW5 256 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 FZR1Q9UM11 496 aa26.35■■□□□ 1.81
CSNK1E-206ENST00000413574 SPG11Q96JI7 2443 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 M0R135 149 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 LCKP06239 509 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 OTX1P32242 354 aaPredicted RBP26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 RAD52P43351 418 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 FABP6P51161 128 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 SPATA46Q5T0L3 261 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 ZNF322Q6U7Q0 402 aaPredicted RBP26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 OR1J1Q8NGS3 322 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 ZNF799Q96GE5 643 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 DHRS9Q9BPW9 319 aa26.34■■□□□ 1.81
CSNK1E-206ENST00000413574 GLRXP35754 106 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 KRT77Q7Z794 578 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 CNBD2Q96M20 576 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 DCLRE1CQ96SD1 692 aaKnown RBP26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 MNTQ99583 582 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 POFUT1Q9H488 388 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 LRP12Q9Y561 859 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 PCDHGB5Q9Y5G0 923 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 CSMD1Q96PZ7 3565 aa26.33■■□□□ 1.81
CSNK1E-206ENST00000413574 XPNPEP2O43895 674 aa26.32■■□□□ 1.8
CSNK1E-206ENST00000413574 ICMTO60725 284 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms