RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 CANT1Q8WVQ1 401 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 HPS1Q92902 700 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 CMBLQ96DG6 245 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 CHID1Q9BWS9 393 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 DCAF16Q9NXF7 216 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 PURGQ9UJV8 347 aaKnown RBP16.18■□□□□ 0.18
SF3A1-202ENST00000411423 CDC42EP3Q9UKI2 254 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 POLR1DQ9Y2S0 133 aa16.18■□□□□ 0.18
SF3A1-202ENST00000411423 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■■□□□ 14.5
SF3A1-202ENST00000411423 ADH4P08319 380 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 RAP2AP10114 183 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 LMO4P61968 165 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 MVKQ03426 396 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 TRAP1Q12931 704 aaKnown RBP16.17■□□□□ 0.18
SF3A1-202ENST00000411423 HLXQ14774 488 aaPredicted RBP16.17■□□□□ 0.18
SF3A1-202ENST00000411423 MOGQ16653 247 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 FAM120AOSQ5T036 256 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 UNQ6126/PRO20091Q6UXV3 157 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 NAA40Q86UY6 237 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 C1orf174Q8IYL3 243 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 LINC00471Q8N535 108 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 OR51L1Q8NGJ5 315 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 OR10S1Q8NGN2 331 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 TSSK6Q9BXA6 273 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 DGCR6LQ9BY27 220 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 REEP1Q9H902 201 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 SAP30LQ9HAJ7 183 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 TBC1D23Q9NUY8 699 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 PTTG3PQ9NZH4 202 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 CYB5R1Q9UHQ9 305 aa16.17■□□□□ 0.18
SF3A1-202ENST00000411423 TVP23AA6NH52 213 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 TIMM8AO60220 97 aaPredicted RBP16.16■□□□□ 0.18
SF3A1-202ENST00000411423 FAM157CP0CG43 387 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 CLUP10909 449 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 KITLGP21583 273 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 CDK5R2Q13319 367 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 FAM209AQ5JX71 171 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 ARL9Q6T311 187 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 HS3ST5Q8IZT8 346 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 LNX2Q8N448 690 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 LINC01356Q8N9X3 169 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 GJC3Q8NFK1 279 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 OR10G2Q8NGC3 310 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 OR52L1Q8NGH7 329 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 OR9Q1Q8NGQ5 310 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 HAVCR1Q96D42 359 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 MAP6Q96JE9 813 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 LRGUKQ96M69 825 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 COQ7Q99807 217 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 BEX2Q9BXY8 128 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 DECR2Q9NUI1 292 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 ATPIF1Q9UII2 106 aa16.16■□□□□ 0.18
SF3A1-202ENST00000411423 TANC2Q9HCD6 1990 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 AQP12BA6NM10 295 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 TPD52L2O43399 206 aaKnown RBP16.15■□□□□ 0.18
SF3A1-202ENST00000411423 GYPBP06028 91 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 CD55P08174 381 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 PRSS12P56730 875 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 CRMP1Q14194 572 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 CR1LQ2VPA4 569 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 RPL13AP3Q6NVV1 102 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 AQP12AQ8IXF9 295 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 FEVQ99581 238 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 RBM4Q9BWF3 364 aaKnown RBP16.15■□□□□ 0.18
SF3A1-202ENST00000411423 NMNAT2Q9BZQ4 307 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 SHARPINQ9H0F6 387 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 HDHD2Q9H0R4 259 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 WDR76Q9H967 626 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 WIPI2Q9Y4P8 454 aa16.15■□□□□ 0.18
SF3A1-202ENST00000411423 PLSCR5A0PG75 271 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 DHRS12A0PJE2 317 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 C5orf63A6NC05 138 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 GYG2O15488 501 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 CST1P01037 141 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 HLA-DQA2P01906 255 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 MT-ND5P03915 603 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 ACSM4P0C7M7 580 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 GSTM3P21266 225 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 COLCA1Q6ZS62 124 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 OR5AS1Q8N127 324 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 IQCF1Q8N6M8 205 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 PTP4A1Q93096 173 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 SLCO4A1Q96BD0 722 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 DCLRE1CQ96SD1 692 aaKnown RBP16.14■□□□□ 0.17
SF3A1-202ENST00000411423 HCAR1Q9BXC0 346 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 LPAR2Q9HBW0 351 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 CYSLTR2Q9NS75 346 aa16.14■□□□□ 0.17
SF3A1-202ENST00000411423 DEAF1O75398 565 aaPredicted RBP16.13■□□□□ 0.17
SF3A1-202ENST00000411423 OR2T2Q6IF00 324 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 CD300LDQ6UXZ3 194 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 FBXW12Q6X9E4 464 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 ZNF511Q8NB15 262 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 PROKR2Q8NFJ6 384 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 GIPC3Q8TF64 312 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 CCL17Q92583 94 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 ELMOD3Q96FG2 381 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 PITX2Q99697 317 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 LPAR3Q9UBY5 353 aa16.13■□□□□ 0.17
SF3A1-202ENST00000411423 CGGBP1Q9UFW8 167 aaPredicted RBP16.13■□□□□ 0.17
SF3A1-202ENST00000411423 ZDHHC8Q9ULC8 765 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms