RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SUCLG1P53597 346 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 LSM6P62312 80 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 TATDN3Q17R31 274 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 CLEC1AQ8NC01 280 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 OR2M7Q8NG81 312 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 GCDHQ92947 438 aaPredicted RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 INTS12Q96CB8 462 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 FER1L6-AS2Q96M78 137 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 MARVELD1Q9BSK0 173 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 ZNF416Q9BWM5 594 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 RBM24Q9BX46 236 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 NELFAQ9H3P2 528 aa18.32■□□□□ 0.52
USP39-203ENST00000409470 DDX28Q9NUL7 540 aaKnown RBP18.32■□□□□ 0.52
USP39-203ENST00000409470 KIAA1549Q9HCM3 1950 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 HMX3A6NHT5 357 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 SULT1B1O43704 296 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 GDNFP39905 211 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 PTH2RP49190 550 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 POU3F4P49335 361 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 SPOCK1Q08629 439 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 PLA2G7Q13093 441 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 OR1C1Q15619 314 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 OR10D3Q8NH80 312 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 FAM3DQ96BQ1 224 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 NKX3-1Q99801 234 aaPredicted RBP18.31■□□□□ 0.52
USP39-203ENST00000409470 ULBP2Q9BZM5 246 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 MOB1AQ9H8S9 216 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 PLA2G3Q9NZ20 509 aa18.31■□□□□ 0.52
USP39-203ENST00000409470 MEGF11A6BM72 1044 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 GABARAPH6UMI1 98 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 DHHO43323 396 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 TMIGD3P0DMS9 266 aaPredicted RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 C2orf76Q3KRA6 126 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 OR51A2Q8NGJ7 313 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 FCAMRQ8WWV6 532 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 ROBO4Q8WZ75 1007 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 CREB3L1Q96BA8 519 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 FGGYQ96C11 551 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 B3GNT4Q9C0J1 378 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 PNRC2Q9NPJ4 139 aaKnown RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 ZNF275Q9NSD4 429 aaPredicted RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 B4GALT7Q9UBV7 327 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 NUFIP1Q9UHK0 495 aaKnown RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 LOC100289279A0A1B0GTE1 492 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 A0A1B0GVI7 797 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 DCDC2BA2VCK2 349 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 INMT-MINDY4F8WBC2 141 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 KRT33AO76009 404 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 RFC3P40938 356 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 ZNF84P51523 738 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 ZNF133P52736 654 aaPredicted RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 TAS2R20P59543 309 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 PLA1AQ53H76 456 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 OR52I2Q8NH67 350 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 C15orf40Q8WUR7 153 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 HES7Q9BYE0 225 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 DPAGT1Q9H3H5 408 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 CGGBP1Q9UFW8 167 aaPredicted RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 FOXD3Q9UJU5 478 aaPredicted RBP18.3■□□□□ 0.52
USP39-203ENST00000409470 ZNF221Q9UK13 617 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 ALG5Q9Y673 324 aa18.3■□□□□ 0.52
USP39-203ENST00000409470 TRAPPC2P0DI81 140 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 TRAPPC2BP0DI82 140 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 SLC2A1P11166 492 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 HTR2CP28335 458 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 BTCP35070 178 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 GNALP38405 381 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 NUBP1P53384 320 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 GFRA1P56159 465 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 ZNF121P58317 390 aaPredicted RBP18.29■□□□□ 0.52
USP39-203ENST00000409470 TBRG1Q3YBR2 411 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 GLYATL3Q5SZD4 288 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 COMMD2Q86X83 199 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 C20orf196Q8IYI0 205 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 JAGN1Q8N5M9 183 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 OR6F1Q8NGZ6 308 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 ADGRG7Q96K78 797 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 C7orf50Q9BRJ6 194 aaKnown RBP18.29■□□□□ 0.52
USP39-203ENST00000409470 FLVCR1Q9Y5Y0 555 aa18.29■□□□□ 0.52
USP39-203ENST00000409470 SPAARA0A1B0GVQ0 90 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 FTH1P19P0C7X4 201 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 CX3CR1P49238 355 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 EFNB2P52799 333 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 RAB25P57735 213 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 GRB2P62993 217 aaKnown RBP18.28■□□□□ 0.52
USP39-203ENST00000409470 MRPS10P82664 201 aaKnown RBP18.28■□□□□ 0.52
USP39-203ENST00000409470 GALK2Q01415 458 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 KLF9Q13886 244 aaPredicted RBP18.28■□□□□ 0.52
USP39-203ENST00000409470 FAM166AQ6J272 317 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 SULF2Q8IWU5 870 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 LRRC18Q8N456 261 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 ZNF283Q8N7M2 679 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 OR51E1Q8TCB6 317 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 KCNK15Q9H427 330 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 PLEKHA1Q9HB21 404 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 HLA-DMAP28067 261 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 MNDAP41218 407 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 SNTB2Q13425 540 aaKnown RBP18.28■□□□□ 0.52
USP39-203ENST00000409470 PDSS1Q5T2R2 415 aa18.28■□□□□ 0.52
USP39-203ENST00000409470 FOXL2NBQ6ZUU3 175 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms