RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 LYPD2Q6UXB3 125 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 ZNF841Q6ZN19 808 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 NLRC3Q7RTR2 1065 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 SLC26A7Q8TE54 656 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 ASB9Q96DX5 294 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 HOPXQ9BPY8 73 aaPredicted RBP10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 OR2H1Q9GZK4 316 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 SPAG4Q9NPE6 437 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 NANSQ9NR45 359 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 KIF17Q9P2E2 1029 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 CD300AQ9UGN4 299 aa10.65□□□□□ -0.7
CHRNA1-203ENST00000409219 ZNF816-ZNF321PA0A0X1KG74 233 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 IFNL4K9M1U5 179 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 GPR37O15354 613 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 TRMUO75648 421 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 TOX4O94842 621 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 ARHGDIAP52565 204 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 GTF2A1P52655 376 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 MS4A2Q01362 244 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 FMODQ06828 376 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 TRIM25Q14258 630 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 HERPUD1Q15011 391 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 SAMD4BQ5PRF9 694 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 LINC00114Q6XXX2 140 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 NPEPL1Q8NDH3 523 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 OR10AD1Q8NGE0 317 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 NFKBIDQ8NI38 313 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 PYDC1Q8WXC3 89 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 ASB10Q8WXI3 467 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 LRTOMTQ8WZ04 291 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 SGCDQ92629 289 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 ZBTB18Q99592 522 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 TRIM15Q9C019 465 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 TOR3AQ9H497 397 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 ABCD2Q9UBJ2 740 aa10.64□□□□□ -0.71
CHRNA1-203ENST00000409219 IGHV1-69DA0A0B4J2H0 117 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 CENPBD1B2RD01 187 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 ZNF879B4DU55 563 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 C5orf58C9J3I9 102 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 MCIDASD6RGH6 385 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 ANGPT2O15123 496 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 CHP2O43745 196 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 FSTL3O95633 263 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 ABHD16AO95870 558 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 NPPAP01160 153 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 IGHV1-69P01742 117 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 ASAH2BP0C7U1 165 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 FADDQ13158 208 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 SGCAQ16586 387 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 Q6ZTK2 550 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 PHF21AQ96BD5 680 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 NMD3Q96D46 503 aaKnown RBP10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 CMBLQ96DG6 245 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 DUS3LQ96G46 650 aaKnown RBP10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 MEGF10Q96KG7 1140 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 WDFY2Q96P53 400 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 ZNF184Q99676 751 aaPredicted RBP10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 VCX3BQ9H321 246 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 DPAGT1Q9H3H5 408 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 GID8Q9NWU2 228 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 ZNF229Q9UJW7 825 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
CHRNA1-203ENST00000409219 FXYD1O00168 92 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 KPNA4O00629 521 aaPredicted RBP10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 SLC22A3O75751 556 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 BAG2O95816 211 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 F13BP05160 661 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 IL6P05231 212 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 ZNF181Q2M3W8 571 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 C6orf10Q5SRN2 563 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 FAM27BQ5VT28 67 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 CCBE1Q6UXH8 406 aaPredicted RBP10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 DCDC5Q6ZRR9 648 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 NANOGNBQ7Z5D8 188 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 RANBP3LQ86VV4 465 aaPredicted RBP10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 PTOV1Q86YD1 416 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 ALDH16A1Q8IZ83 802 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 C10orf111Q8N326 155 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 DPP10Q8N608 796 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 C11orf44Q8N8P7 122 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 SCCPDHQ8NBX0 429 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 NSMAFQ92636 917 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 LHX4Q969G2 390 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 SPDL1Q96EA4 605 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 SPATA5L1Q9BVQ7 753 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 SIRPDQ9H106 197 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 SMURF2Q9HAU4 748 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 ADA2Q9NZK5 511 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 BIRC6Q9NR09 4857 aa10.62□□□□□ -0.71
CHRNA1-203ENST00000409219 IGHV3-64DA0A0J9YX35 117 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 PRORSD1PA6NEY8 169 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 BLOC1S5-TXNDC5H3BN57 136 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 CLIC1O00299 241 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 LYPD3O95274 346 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 THY1P04216 161 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 RPSAP08865 295 aaKnown RBP10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 UMPSP11172 480 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 HSD17B1P14061 328 aa10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 HOXB9P17482 250 aaPredicted RBP10.61□□□□□ -0.71
CHRNA1-203ENST00000409219 LAP3P28838 519 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms