RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 LOC102725191A0A1B0GVB3 256 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 MFSD2BA6NFX1 497 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 LANCL1O43813 399 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 IGHA1P01876 353 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 CD22P20273 847 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 MORN1Q5T089 497 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 METRNLQ641Q3 311 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 PRRX2Q99811 253 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 LYRM4Q9HD34 91 aa16.08■□□□□ 0.16
SMPD4-202ENST00000409031 RNF212BA8MTL3 300 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 GALR3O60755 368 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 JMJD7P0C870 316 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 DMKNQ6E0U4 476 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 TMEFF1Q8IYR6 380 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 ZFP62Q8NB50 900 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 IL1F10Q8WWZ1 152 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 TRMT61AQ96FX7 289 aaKnown RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 TEX101Q9BY14 249 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 SLC5A6Q9Y289 635 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 PCDHGA9Q9Y5G4 932 aaKnown RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 TMED7-TICAM2A0A0A6YYA0 188 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 SDCBPO00560 298 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 IL33O95760 270 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 CTSAP10619 480 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 PPP1R1AQ13522 171 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 FAM69BQ5VUD6 431 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 OR2A2Q6IF42 318 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 ARIH2OSQ8N7S6 290 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 OR51I2Q9H344 312 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 NXT1Q9UKK6 140 aaKnown RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 DAPP1Q9UN19 280 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 TMED7Q9Y3B3 224 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 KIR2DS5A0A0G2JLQ3 304 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 A0A0G2JNG1 304 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 A8MVM7 634 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 CLDN34H7C241 214 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 KIR2DS3K7RE56 304 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 ZFPL1O95159 310 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 IGF2P01344 180 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 GP1BAP07359 652 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 HNF4GQ14541 408 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 KIR2DS5Q14953 304 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 AADACL3Q5VUY0 350 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 SLC39A5Q6ZMH5 540 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 MRPS18AQ9NVS2 196 aaKnown RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF586Q9NXT0 402 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 COA3Q9Y2R0 106 aaPredicted RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 PRSS54Q6PEW0 395 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 MED25Q71SY5 747 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 ZNF429Q86V71 674 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 OR5L1Q8NGL2 311 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 APOBEC3BQ9UH17 382 aaKnown RBP16.07■□□□□ 0.16
SMPD4-202ENST00000409031 SLC22A13Q9Y226 551 aa16.07■□□□□ 0.16
SMPD4-202ENST00000409031 DUS4LO95620 317 aaKnown RBP16.06■□□□□ 0.16
SMPD4-202ENST00000409031 RAB5AP20339 215 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 VIPR2P41587 438 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 SLC35A1P78382 337 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 PLCXD3Q63HM9 321 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 LAIR2Q6ISS4 152 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 MRPL21Q7Z2W9 205 aaKnown RBP16.06■□□□□ 0.16
SMPD4-202ENST00000409031 CNRIP1Q96F85 164 aaPredicted RBP16.06■□□□□ 0.16
SMPD4-202ENST00000409031 SMIM7Q9BQ49 75 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 RSRP1Q9BUV0 290 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 ALKBH4Q9NXW9 302 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 CTSFQ9UBX1 484 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 LAMP3Q9UQV4 416 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 LILRB3O75022 631 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 F11P03951 625 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 MFAP5Q13361 173 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 RUNX3Q13761 415 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 MELKQ14680 651 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 NCMAPQ5T1S8 102 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 ETFBKMTQ8IXQ9 262 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 TSTD1Q8NFU3 115 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 SIGLEC11Q96RL6 698 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
SMPD4-202ENST00000409031 NTSR1P30989 418 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 P2RY2P41231 377 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 GABREP78334 506 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 C9orf170A2RU37 121 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 GJE1A6NN92 205 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 NPIPB8E9PQR5 432 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 UTS2O95399 124 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 SYNGR4O95473 234 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 CYBAP13498 195 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 GNB3P16520 340 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 PWWP2BQ6NUJ5 590 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 PRR18Q8N4B5 295 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 OR4S1Q8NGB4 309 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 ADGRL4Q9HBW9 690 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 GABRQQ9UN88 632 aa16.06■□□□□ 0.16
SMPD4-202ENST00000409031 LSM2Q9Y333 95 aaKnown RBP16.06■□□□□ 0.16
SMPD4-202ENST00000409031 CTAG2O75638 210 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 KITLGP21583 273 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 TIAL1Q01085 375 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPD4-202ENST00000409031 DEFB115Q30KQ5 88 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 LCN15Q6UWW0 184 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 MYEOVQ96EZ4 313 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 KIF13BQ9NQT8 1826 aa16.05■□□□□ 0.16
SMPD4-202ENST00000409031 HCRTR1O43613 425 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms