RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 EDDM3AQ14507 147 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 SHBQ15464 509 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 EXOSC3Q9NQT5 275 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 YBX2Q9Y2T7 364 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 OR6C65A6NJZ3 312 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF732B4DXR9 585 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 BCKDHBP21953 392 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF808Q8N4W9 903 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 C11orf40Q8WZ69 217 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 BSCL2Q96G97 398 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 CTSFQ9UBX1 484 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 ARPC4-TTLL3A0A0A6YYG9 625 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 PIAS2O75928 621 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 GIPP09681 153 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 ALOX5APP20292 161 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 CHRNB4P30926 498 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 PPIAP62937 165 aaKnown RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 BATF2Q8N1L9 274 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 HSD17B11Q8NBQ5 300 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 OR1N1Q8NGS0 311 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 SEH1LQ96EE3 360 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 SIRT5Q9NXA8 310 aa12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 SIPA1L3O60292 1781 aaPredicted RBP12.06□□□□□ -0.48
CACNA1C-222ENST00000406454 DHHO43323 396 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF92Q03936 586 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 AKR1C1Q04828 323 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 HLA-BQ31612 363 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 PRSS36Q5K4E3 855 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF574Q6ZN55 896 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 PXT1Q8NFP0 134 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 CADM4Q8NFZ8 388 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 PLEKHF2Q9H8W4 249 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 SLCO1C1Q9NYB5 712 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 SLCO1B1Q9Y6L6 691 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 A0A087WUJ7 227 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF705FA8MVS1 300 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 IMPA2O14732 288 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 CHEK1O14757 476 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 C1QBP02746 253 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 CSF3P09919 207 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF705DP0CH99 300 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF705BP0CI00 300 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 RPL7P18124 248 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ARR3P36575 388 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 FZD2Q14332 565 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 CST9LP1Q5W188 147 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 TMUB2Q71RG4 321 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 RHOUQ7L0Q8 258 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 OR51A4Q8NGJ6 313 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ING1Q9UK53 422 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 CTSVO60911 334 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 SNCGO76070 127 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 PCK2Q16822 640 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 H1FXQ92522 213 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 EXO1Q9UQ84 846 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 A0A0B4J203 849 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 UBE2KP61086 200 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 RBMS3Q6XE24 437 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 S100A7AQ86SG5 101 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF687Q8N1G0 1237 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 DDOQ99489 341 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 GPATCH2Q9NW75 528 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 HDGFL3Q9Y3E1 203 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 LOC102724200A0A096LPH7 203 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 A0A0B4J2E0 115 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 A0A1B0GX12 115 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 RPA2P15927 270 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 OTPQ5XKR4 325 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 AMER3Q8N944 861 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 SPACA9Q96E40 222 aaPredicted RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 UHRF2Q96PU4 802 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 FAM234AQ9H0X4 552 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 CRLF2Q9HC73 371 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 XRCC2O43543 280 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 PTAFRP25105 342 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 TFAP2EQ6VUC0 442 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 LHFPL2Q6ZUX7 228 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 TMEM217Q8N7C4 229 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 SUMF1Q8NBK3 374 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 AKIP1Q9NQ31 210 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 C19orf12Q9NSK7 152 aa12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 MYO5AQ9Y4I1 1855 aaKnown RBP12.05□□□□□ -0.48
CACNA1C-222ENST00000406454 HRO43593 1189 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 RPS23P62266 143 aaKnown RBP12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 OR2G2Q8NGZ5 317 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 SARAFQ96BY9 339 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 SPACA5Q96QH8 159 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 ARRDC1-AS1Q9H2J1 176 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 ZNF318Q5VUA4 2279 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 LRRC30A6NM36 301 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 CTXN2P0C2S0 81 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 OR8G1Q15617 311 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 LAIR1Q6GTX8 287 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 ZPBPQ9BS86 351 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 IGHV3-15A0A0B4J1V0 119 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 HS3ST1O14792 307 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 EFSO43281 561 aa12.04□□□□□ -0.48
CACNA1C-222ENST00000406454 CBR3O75828 277 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms