RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 ELFN2Q5R3F8 820 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 LINC01590Q5TEZ4 76 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF691Q5VV52 312 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 SLC18B1Q6NT16 456 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF774Q6NX45 483 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 IZUMO2Q6UXV1 221 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 SLC16A9Q7RTY1 509 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 DPY19L4Q7Z388 723 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 ENTHD1Q8IYW4 607 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 OR4F15Q8NGB8 312 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 AKR7LQ8NHP1 331 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 RHOXF1Q8NHV9 184 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 FGFBP3Q8TAT2 258 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF582Q96NG8 517 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-204ENST00000405578 MYCBPQ99417 103 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-204ENST00000405578 MNTQ99583 582 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 YIPF3Q9GZM5 350 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 Q9H521 79 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 WDR76Q9H967 626 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 HAO2Q9NYQ3 351 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 DNAJC27Q9NZQ0 273 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 LAMP5Q9UJQ1 280 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 GDF2Q9UK05 429 aaPredicted RBP9.14□□□□□ -0.95
RPAIN-204ENST00000405578 LHFPL6Q9Y693 200 aa9.14□□□□□ -0.95
RPAIN-204ENST00000405578 USF3Q68DE3 2245 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 C5orf49A4QMS7 147 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 PHYHO14832 338 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 RER1O15258 196 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 PHF1O43189 567 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ENTPD6O75354 484 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 APOC1P02654 83 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 LYNP07948 512 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 CCNOP22674 350 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 SLC2A5P22732 501 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 NAA10P41227 235 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 RAD52P43351 418 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 MTNR1AP48039 350 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 AQP4P55087 323 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 RPS23P62266 143 aaKnown RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 DBPQ10586 325 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 EIF2B1Q14232 305 aaKnown RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 GGTLC2Q14390 218 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 PCK2Q16822 640 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 OTPQ5XKR4 325 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ADAM5Q6NVV9 412 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 TMEM154Q6P9G4 183 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 KCTD18Q6PI47 426 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 CORO6Q6QEF8 472 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF704Q6ZNC4 412 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 VASH1Q7L8A9 365 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 DCXRQ7Z4W1 244 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 BCDIN3DQ7Z5W3 292 aaKnown RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 LINC00346Q8IVM7 164 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 TIGD4Q8IY51 512 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 C1orf174Q8IYL3 243 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 OR1F12Q8NHA8 337 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 OTOSQ8NHW6 89 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ZNRF4Q8WWF5 429 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ASB17Q8WXJ9 295 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 TFAP2CQ92754 450 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 SPTSSAQ969W0 71 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 DCLRE1CQ96SD1 692 aaKnown RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 CCL19Q99731 98 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 COQ7Q99807 217 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 WNT5BQ9H1J7 359 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 MARCH7Q9H992 704 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ELOVL3Q9HB03 270 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 NOX3Q9HBY0 568 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 CENPMQ9NSP4 180 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 FAIMQ9NVQ4 179 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 RPL36Q9Y3U8 105 aaKnown RBP9.13□□□□□ -0.95
RPAIN-204ENST00000405578 PCDHGB1Q9Y5G3 927 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 ATP23Q9Y6H3 246 aa9.13□□□□□ -0.95
RPAIN-204ENST00000405578 IGHV2OR16-5A0A0B4J2B6 119 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 IRGMA1A4Y4 181 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 CCDC182A6NF36 153 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF670-ZNF695F2Z2N8 137 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 SELENOFO60613 162 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 CELA3BP08861 270 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 MRPL3P09001 348 aaKnown RBP9.12□□□□□ -0.95
RPAIN-204ENST00000405578 APEX1P27695 318 aaKnown RBP9.12□□□□□ -0.95
RPAIN-204ENST00000405578 TPTEP56180 551 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 ACTC1P68032 377 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 ACTA1P68133 377 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 HIST1H3AP68431 136 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 MAD2L1BPQ15013 274 aaPredicted RBP9.12□□□□□ -0.95
RPAIN-204ENST00000405578 C6orf52Q5T4I8 152 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 HIST2H3PS2Q5TEC6 136 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 LYPD4Q6UWN0 246 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 B3GLCTQ6Y288 498 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 HIST2H3AQ71DI3 136 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 RHOUQ7L0Q8 258 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 THAP5Q7Z6K1 395 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 ZNF584Q8IVC4 421 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 CPEB3Q8NE35 698 aaKnown RBP9.12□□□□□ -0.95
RPAIN-204ENST00000405578 OR51G2Q8NGK0 314 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 THEM6Q8WUY1 208 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 UBE2FQ969M7 185 aa9.12□□□□□ -0.95
RPAIN-204ENST00000405578 SLAMF6Q96DU3 332 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms