RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 KRT80Q6KB66 452 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 RHOUQ7L0Q8 258 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 NUP37Q8NFH4 326 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 AMBNQ9NP70 447 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 CENPMQ9NSP4 180 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 RAB26Q9ULW5 256 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 COPS3Q9UNS2 423 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 PLCE1Q9P212 2302 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 ABCA12Q86UK0 2595 aa25.34■■□□□ 1.65
USP42-202ENST00000404008 E7EQL1 145 aa25.33■■□□□ 1.65
USP42-202ENST00000404008 ATP6V1E1P36543 226 aa25.33■■□□□ 1.65
USP42-202ENST00000404008 SPATC1Q76KD6 591 aa25.33■■□□□ 1.65
USP42-202ENST00000404008 RFLNBQ8N5W9 214 aa25.33■■□□□ 1.65
USP42-202ENST00000404008 RPL36Q9Y3U8 105 aaKnown RBP25.33■■□□□ 1.65
USP42-202ENST00000404008 SPEF1Q9Y4P9 236 aa25.33■■□□□ 1.65
USP42-202ENST00000404008 J3QRE1 110 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 HS3ST1O14792 307 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 MYF6P23409 242 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 OPRL1P41146 370 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 KRTAP10-9P60411 292 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 SNTB2Q13425 540 aaKnown RBP25.32■■□□□ 1.64
USP42-202ENST00000404008 LAIR2Q6ISS4 152 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 LGALS12Q96DT0 336 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 C4orf45Q96LM5 186 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 DCLRE1CQ96SD1 692 aaKnown RBP25.32■■□□□ 1.64
USP42-202ENST00000404008 COPS4Q9BT78 406 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 CISD1Q9NZ45 108 aaKnown RBP25.32■■□□□ 1.64
USP42-202ENST00000404008 EXOGQ9Y2C4 368 aaKnown RBP25.32■■□□□ 1.64
USP42-202ENST00000404008 ROS1P08922 2347 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 ITPR2Q14571 2701 aa25.32■■□□□ 1.64
USP42-202ENST00000404008 OR2T7P0C7T2 308 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 OTX1P32242 354 aaPredicted RBP25.31■■□□□ 1.64
USP42-202ENST00000404008 UCP2P55851 309 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 ZNF101Q8IZC7 436 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 OR2T27Q8NH04 317 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 ASB17Q8WXJ9 295 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 SPTSSAQ969W0 71 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 UBTD1Q9HAC8 227 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 CA10Q9NS85 328 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 MRPS18AQ9NVS2 196 aaKnown RBP25.31■■□□□ 1.64
USP42-202ENST00000404008 EIF3KQ9UBQ5 218 aaKnown RBP25.31■■□□□ 1.64
USP42-202ENST00000404008 F5H5K5 113 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 SMPD2O60906 423 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 FAM157BP0CG42 384 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 SLC15A1P46059 708 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 CXCR4P61073 352 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 GRB2P62993 217 aaKnown RBP25.31■■□□□ 1.64
USP42-202ENST00000404008 TAF13Q15543 124 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 ARL9Q6T311 187 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 OR10H4Q8NGA5 316 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 IPCEF1Q8WWN9 437 aaPredicted RBP25.31■■□□□ 1.64
USP42-202ENST00000404008 FBXW5Q969U6 566 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 KCNJ15Q99712 375 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 OR51B6Q9H340 312 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 GRIP1Q9Y3R0 1128 aa25.31■■□□□ 1.64
USP42-202ENST00000404008 PRR32B1ATL7 298 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 ZNF670-ZNF695F2Z2N8 137 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 PHYHO14832 338 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 ABHD16AO95870 558 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 ACSM4P0C7M7 580 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 RAD52P43351 418 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 RAB40BQ12829 278 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 KCTD18Q6PI47 426 aaPredicted RBP25.3■■□□□ 1.64
USP42-202ENST00000404008 TBX5Q99593 518 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 BCL2L14Q9BZR8 327 aa25.3■■□□□ 1.64
USP42-202ENST00000404008 A0A1W2PQL4 384 aaPredicted RBP25.29■■□□□ 1.64
USP42-202ENST00000404008 M0R135 149 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 GPRIN2O60269 458 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 H2BFMP0C1H6 154 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 THBS4P35443 961 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 GLRXP35754 106 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 TPTEP56180 551 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 ROM1Q03395 351 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 ZNF322Q6U7Q0 402 aaPredicted RBP25.29■■□□□ 1.64
USP42-202ENST00000404008 LRRN1Q6UXK5 716 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 RFPL4BQ6ZWI9 263 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 TMEM171Q8WVE6 324 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 ZNF799Q96GE5 643 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 DHRS9Q9BPW9 319 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 TTTY10Q9BZA0 68 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 ZNF442Q9H7R0 627 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 ELOVL3Q9HB03 270 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 TBCCD1Q9NVR7 557 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 PCDHGB1Q9Y5G3 927 aa25.29■■□□□ 1.64
USP42-202ENST00000404008 SETXQ7Z333 2677 aaKnown RBP25.28■■□□□ 1.64
USP42-202ENST00000404008 CSMD2Q7Z408 3487 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 NGFP01138 241 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 HSD11B1P28845 292 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 ACTC1P68032 377 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 ACTA1P68133 377 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 KLHL22Q53GT1 634 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 DEGS2Q6QHC5 323 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 VHLLQ6RSH7 139 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 UNQ6126/PRO20091Q6UXV3 157 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 SSX6Q7RTT6 188 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 KRT77Q7Z794 578 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 ZNF611Q8N823 705 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 ABHD4Q8TB40 342 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 OR8B4Q96RC9 309 aa25.28■■□□□ 1.64
USP42-202ENST00000404008 SLCO1C1Q9NYB5 712 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms