RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 FOLR1P15328 257 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 MDKP21741 143 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 DMRTC1Q5HYR2 192 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 ABHD17CQ6PCB6 329 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 RSPO2Q6UXX9 243 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 KDF1Q8NAX2 398 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 OR5D14Q8NGL3 314 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 IRF7Q92985 503 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 GNG13Q9P2W3 67 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 FBXL17Q9UF56 701 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 RAB22AQ9UL26 194 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 NPIPB8E9PQR5 432 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 CD14P08571 375 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 PPM1AP35813 382 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 CDX1P47902 265 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 UBE2V2Q15819 145 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 DEFB115Q30KQ5 88 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM41BQ5BJD5 291 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM244Q5VVB8 128 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 TPGS2Q68CL5 300 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 SSX7Q7RTT5 188 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 OR52R1Q8NGF1 315 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 OR10AC1Q8NH08 325 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 SLC39A7Q92504 469 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 SARGQ9BW04 601 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 SLC17A9Q9BYT1 436 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 PLEKHJ1Q9NW61 149 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 ST6GALNAC2Q9UJ37 374 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM272A0A1B0GTI8 110 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 C5orf52A6NGY3 159 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 NXPH3O95157 252 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 CD160O95971 181 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 EDN3P14138 238 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 CPMP14384 443 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 GABRR1P24046 479 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 LIMK1P53667 647 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 RPS15P62841 145 aaKnown RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 MICBQ29980 383 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 SLC35D3Q5M8T2 416 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM18Q96B42 140 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 SYT3Q9BQG1 590 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 G6PC3Q9BUM1 346 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM59Q9BXS4 323 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 OR8D2Q9GZM6 311 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 CREBZFQ9NS37 354 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 LAMP3Q9UQV4 416 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 CARHSP1Q9Y2V2 147 aaKnown RBP8.44□□□□□ -1.06
COL28A1-201ENST00000399429 NRAPQ86VF7 1730 aa8.44□□□□□ -1.06
COL28A1-201ENST00000399429 DUS4LO95620 317 aaKnown RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 TRGC2P03986 189 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 SLC25A4P12235 298 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 LPAR6P43657 344 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ARRB1P49407 418 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 P2RY4P51582 365 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 PPP2CBP62714 309 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 PPP2CAP67775 309 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 GLO1Q04760 184 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 TAF9Q16594 264 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 NKAIN2Q5VXU1 208 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF66Q6ZN08 573 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 PARS2Q7L3T8 475 aaKnown RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 LINC00346Q8IVM7 164 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 METTL27Q8N6F8 245 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 SLC22A18Q96BI1 424 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 TXN2Q99757 166 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 WDR13Q9H1Z4 485 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ZMIZ1Q9ULJ6 1067 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 A0A1W2PPE3 182 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 IGLON5A6NGN9 336 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 UBE2CO00762 179 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 GP1BBP13224 206 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 MST1P26927 711 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 BCL6P41182 706 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 CSNK1EP49674 416 aaKnown RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 TMEM33P57088 247 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 PRSS54Q6PEW0 395 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ABHD12BQ7Z5M8 362 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 TVP23CQ96ET8 276 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 A0A1W2PPQ1 181 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ELNP15502 786 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF16P17020 682 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 EPHA1P21709 976 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ZNF136P52737 540 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 MLF1P58340 268 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 SPCS3P61009 180 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 SLC35A1P78382 337 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 REEP5Q00765 189 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 DHODHQ02127 395 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 MFGE8Q08431 387 aaPredicted RBP8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ARHGAP19Q14CB8 494 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 TESK1Q15569 626 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 VITQ6UXI7 678 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ADIPOR2Q86V24 386 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 OR51A4Q8NGJ6 313 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 OR13C8Q8NGS7 320 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 GPR119Q8TDV5 335 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 ROBO4Q8WZ75 1007 aa8.43□□□□□ -1.06
COL28A1-201ENST00000399429 LCORQ96JN0 433 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms