RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 KRT80Q6KB66 452 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 LYPD4Q6UWN0 246 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 DPY19L4Q7Z388 723 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 DCXRQ7Z4W1 244 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.23■□□□□ 0.03
CTNS-203ENST00000399306 LRRC75A-AS1Q8N1F1 130 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 OR6N2Q8NGY6 317 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 RNF133Q8WVZ7 376 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 MRPL24Q96A35 216 aaKnown RBP15.23■□□□□ 0.03
CTNS-203ENST00000399306 APOL4Q9BPW4 351 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 LIME1Q9H400 295 aa15.23■□□□□ 0.03
CTNS-203ENST00000399306 ZNF701Q9NV72 531 aaPredicted RBP15.23■□□□□ 0.03
CTNS-203ENST00000399306 NKX1-2Q9UD57 310 aaPredicted RBP15.23■□□□□ 0.03
CTNS-203ENST00000399306 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.23■□□□□ 0.03
CTNS-203ENST00000399306 H0YAE9 185 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 SMPD2O60906 423 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 ABHD16AO95870 558 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 CD8AP01732 235 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 APOC1P02654 83 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 SOD3P08294 240 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 OR4A8P0C604 315 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 ZNF250P15622 560 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 WNT5AP41221 380 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 SLC15A1P46059 708 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 GRB2P62993 217 aaKnown RBP15.22■□□□□ 0.03
CTNS-203ENST00000399306 IL18R1Q13478 541 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 LRRC36Q1X8D7 754 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 RGS7BPQ6MZT1 257 aaPredicted RBP15.22■□□□□ 0.03
CTNS-203ENST00000399306 DEGS2Q6QHC5 323 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 COLCA1Q6ZS62 124 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 GALNT4Q8N4A0 578 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 OR10S1Q8NGN2 331 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 RHOXF1Q8NHV9 184 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 NRGNQ92686 78 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 SPTSSAQ969W0 71 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 SLAMF6Q96DU3 332 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 Q96MT0 163 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 VCX3BQ9H321 246 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 PLK3Q9H4B4 646 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 LAMP3Q9UQV4 416 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 PLEKHA6Q9Y2H5 1048 aa15.22■□□□□ 0.03
CTNS-203ENST00000399306 TEX15Q9BXT5 2789 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 MAST4O15021 2626 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 CSMD2Q7Z408 3487 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 IGLV3-9A0A075B6K5 115 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 PHYHO14832 338 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 LYNP07948 512 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 CCL2P13500 99 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 GABRB1P18505 474 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 ALOX5APP20292 161 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 CCNOP22674 350 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 TPTEP56180 551 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 SELENOVP59797 346 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 MOGQ16653 247 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 RSPO1Q2MKA7 263 aaPredicted RBP15.21■□□□□ 0.03
CTNS-203ENST00000399306 DEFB113Q30KQ7 82 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 OTPQ5XKR4 325 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 DRAM2Q6UX65 266 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 DHRSXQ8N5I4 330 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 ASB17Q8WXJ9 295 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 ZNF582Q96NG8 517 aaPredicted RBP15.21■□□□□ 0.03
CTNS-203ENST00000399306 CNN2Q99439 309 aaKnown RBP15.21■□□□□ 0.03
CTNS-203ENST00000399306 FOXC2Q99958 501 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 ABHD6Q9BV23 337 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 C1QTNF5Q9BXJ0 243 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 GSX2Q9BZM3 304 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 NIPAL2Q9H841 368 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 HSPE1-MOB4S4R3N1 261 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 PMF1-BGLAPU3KQ54 211 aa15.21■□□□□ 0.03
CTNS-203ENST00000399306 USF3Q68DE3 2245 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 CSMD1Q96PZ7 3565 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 H7C417 338 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 M0R129 80 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 GPRIN2O60269 458 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 ACSM4P0C7M7 580 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 PSKH1P11801 424 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 RPS27P42677 84 aaKnown RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 SNRPD2P62316 118 aaKnown RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 ADARB1P78563 741 aaKnown RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 EIF2B1Q14232 305 aaKnown RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 MST1LQ2TV78 715 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 ZNF718Q3SXZ3 478 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 MBNL2Q5VZF2 373 aaKnown RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 KCTD18Q6PI47 426 aaPredicted RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 ZNF101Q8IZC7 436 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 SETD9Q8NE22 299 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 OR5L1Q8NGL2 311 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 OR1J1Q8NGS3 322 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 APOBEC3DQ96AK3 386 aaPredicted RBP15.2■□□□□ 0.02
CTNS-203ENST00000399306 KCNJ15Q99712 375 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 CXXC4Q9H2H0 198 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 SP140LQ9H930 580 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 GPR160Q9UJ42 338 aa15.2■□□□□ 0.02
CTNS-203ENST00000399306 CREBBPQ92793 2442 aa15.19■□□□□ 0.02
CTNS-203ENST00000399306 MYO9AB2RTY4 2548 aa15.19■□□□□ 0.02
CTNS-203ENST00000399306 TMEM129A0AVI4 362 aa15.19■□□□□ 0.02
CTNS-203ENST00000399306 M0R135 149 aa15.19■□□□□ 0.02
CTNS-203ENST00000399306 SELENOFO60613 162 aa15.19■□□□□ 0.02
CTNS-203ENST00000399306 LCKP06239 509 aa15.19■□□□□ 0.02
CTNS-203ENST00000399306 SBK2P0C263 348 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms