RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TGM6O95932 706 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 DRD3P35462 400 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC35A2P78381 396 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 TLE4Q04727 773 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SIAH3Q8IW03 269 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 KIRREL1Q96J84 757 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 PURGQ9UJV8 347 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 NDRG4Q9ULP0 352 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 TXNL1O43396 289 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 PRPH2P23942 346 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 PIGAP37287 484 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 C2orf76Q3KRA6 126 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SPATA46Q5T0L3 261 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 OR1S2Q8NGQ3 325 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SLCO4A1Q96BD0 722 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 RAB22AQ9UL26 194 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 KIAA1217Q5T5P2 1943 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 E9PI62 339 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC2A10O95528 541 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 ELLP55199 621 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 USP51Q70EK9 711 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SPRED1Q7Z699 444 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 TMEM104Q8NE00 496 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 ARV1Q9H2C2 271 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 DIMT1Q9UNQ2 313 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SYT5O00445 386 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SNAPINO95295 136 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 CRYZL1O95825 349 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 CSF3P09919 207 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 MTNR1BP49286 362 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 NRARPQ7Z6K4 114 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 DND1Q8IYX4 353 aaKnown RBP12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 GCNT2Q8N0V5 402 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 TIMM10BQ9Y5J6 103 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 SCGB1D1O95968 90 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 NDUFA6P56556 154 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 OR51F2Q8NH61 342 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 RIMS4Q9H426 269 aaPredicted RBP12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 FZR1Q9UM11 496 aa12.94□□□□□ -0.34
PCDHA11-201ENST00000398640 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 SH2D7A6NKC9 451 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 GLI4P10075 376 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 PCSK6P29122 969 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF133P52736 654 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 RAC1P63000 192 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 ACVR1Q04771 509 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 FAM53BQ14153 422 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 IAH1Q2TAA2 248 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 ASH2LQ9UBL3 628 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 ZNF346Q9UL40 294 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 OSGIN2Q9Y236 505 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 A0A1W2PR80 420 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 FITM1A5D6W6 292 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 SOX18P35713 384 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 IHHQ14623 411 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 NLRC3Q7RTR2 1065 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 LACC1Q8IV20 430 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 TMEM38AQ9H6F2 299 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 FAM212BQ9NTI7 297 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 TAS2R5Q9NYW4 299 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 CTSFQ9UBX1 484 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 TRAF3IP2O43734 574 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 CD22P20273 847 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 PSMB1P20618 241 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 TGM1P22735 817 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 APEX1P27695 318 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 MRPL19P49406 292 aaKnown RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 TLE1Q04724 770 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 GPNMBQ14956 572 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 KDM4DQ6B0I6 523 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 C1orf87Q8N0U7 546 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 C19orf43Q9BQ61 176 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC16A6O15403 523 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 LGI1O95970 557 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 BMP5P22003 454 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 INSM1Q01101 510 aaPredicted RBP12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 SSPNQ14714 243 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 HSD17B11Q8NBQ5 300 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC39A7Q92504 469 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 SDF2Q99470 211 aa12.93□□□□□ -0.34
PCDHA11-201ENST00000398640 ANKRD61A6NGH8 418 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 HMGN4O00479 90 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 CLPPQ16740 277 aaPredicted RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 RNF167Q9H6Y7 350 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC22A11Q9NSA0 550 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 TRGV5A0A0B4J1U4 118 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 RAP2BP61225 183 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 CLN3Q13286 438 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 MPPED2Q15777 294 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 OR51A4Q8NGJ6 313 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 OR51A2Q8NGJ7 313 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SPACA5Q96QH8 159 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 PARP12Q9H0J9 701 aaKnown RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 URB1O60287 2271 aaKnown RBP12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 FAM221AA4D161 298 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 CCSO14618 274 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SIX6O95475 246 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 UBE2G2P60604 165 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 SLC35D3Q5M8T2 416 aa12.92□□□□□ -0.34
PCDHA11-201ENST00000398640 PRAMEF5Q5TYX0 476 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms