RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 C10orf105Q8TEF2 133 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 APOBEC3DQ96AK3 386 aaPredicted RBP12.23□□□□□ -0.45
HDDC2-202ENST00000398153 DIRC2Q96SL1 478 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 OR2J1Q9GZK6 312 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 OR51B6Q9H340 312 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 HINT3Q9NQE9 182 aaKnown RBP12.23□□□□□ -0.45
HDDC2-202ENST00000398153 DDX28Q9NUL7 540 aaKnown RBP12.23□□□□□ -0.45
HDDC2-202ENST00000398153 GRIP1Q9Y3R0 1128 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 COMMD3-BMI1R4GMX3 469 aa12.23□□□□□ -0.45
HDDC2-202ENST00000398153 PLSCR5A0PG75 271 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 C17orf100A8MU93 164 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF593O00488 134 aaPredicted RBP12.22□□□□□ -0.45
HDDC2-202ENST00000398153 CLPTM1O96005 669 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 ADH4P08319 380 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 DAOP14920 347 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 TPTEP56180 551 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 TMEM154Q6P9G4 183 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 CORO6Q6QEF8 472 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 CFAP77Q6ZQR2 320 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 COLCA1Q6ZS62 124 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 SHFQ7M4L6 423 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.22□□□□□ -0.45
HDDC2-202ENST00000398153 LINC00346Q8IVM7 164 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF786Q8N393 782 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 OR51L1Q8NGJ5 315 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 OR6K6Q8NGW6 343 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 UBASH3BQ8TF42 649 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 ZNRF4Q8WWF5 429 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 PYDC1Q8WXC3 89 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 SPTSSAQ969W0 71 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 INTS14Q96SY0 518 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
HDDC2-202ENST00000398153 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 PNRC2Q9NPJ4 139 aaKnown RBP12.22□□□□□ -0.45
HDDC2-202ENST00000398153 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
HDDC2-202ENST00000398153 ZDHHC8Q9ULC8 765 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 FZR1Q9UM11 496 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 OAZ3Q9UMX2 235 aa12.22□□□□□ -0.45
HDDC2-202ENST00000398153 TVP23AA6NH52 213 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 FAM183AA6NL82 134 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 APOC1P02654 83 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 GYPBP06028 91 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 RAC2P15153 192 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 KITLGP21583 273 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 GIFP27352 417 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 GSTT1P30711 240 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
HDDC2-202ENST00000398153 ALDH3B1P43353 468 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 SLC15A1P46059 708 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 PPP2R2BQ00005 443 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 LOXL1Q08397 574 aaPredicted RBP12.21□□□□□ -0.45
HDDC2-202ENST00000398153 SNAPC1Q16533 368 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 RSPO1Q2MKA7 263 aaPredicted RBP12.21□□□□□ -0.45
HDDC2-202ENST00000398153 FBXW12Q6X9E4 464 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 ZNF511Q8NB15 262 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 HAVCR1Q96D42 359 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 MAP6Q96JE9 813 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 PIMREGQ9BSJ6 248 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 TOR3AQ9H497 397 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 WDR76Q9H967 626 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 STARD10Q9Y365 291 aa12.21□□□□□ -0.45
HDDC2-202ENST00000398153 TEP1Q99973 2627 aaKnown RBP12.2□□□□□ -0.46
HDDC2-202ENST00000398153 IGHV4-30-2A0A087WSY4 118 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ZAR1LA6NP61 321 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 VWC2LB2RUY7 222 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ZNF878C9JN71 531 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 RNF223E7ERA6 249 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 H3BNX3 289 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 DBHP09172 617 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ACSM4P0C7M7 580 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 CLUP10909 449 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 IGFBP5P24593 272 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 MMP15P51511 669 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 SLX4IPQ5VYV7 408 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 TMEM236Q5W0B7 351 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 OTPQ5XKR4 325 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 PLBD1Q6P4A8 553 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 DRAM2Q6UX65 266 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 CXXC5Q7LFL8 322 aaKnown RBP12.2□□□□□ -0.46
HDDC2-202ENST00000398153 DCXRQ7Z4W1 244 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 CPOQ8IVL8 374 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ZCCHC24Q8N2G6 241 aaKnown RBP12.2□□□□□ -0.46
HDDC2-202ENST00000398153 CIARTQ8N365 385 aaPredicted RBP12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ST7LQ8TDW4 575 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 SLC7A6Q92536 515 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 RDH5Q92781 318 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 OTULINQ96BN8 352 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 HCAR1Q9BXC0 346 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 OR51V1Q9H2C8 321 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 SEMA6AQ9H2E6 1030 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 TVP23BQ9NYZ1 205 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 TMEFF2Q9UIK5 374 aaPredicted RBP12.2□□□□□ -0.46
HDDC2-202ENST00000398153 ACANP16112 2415 aa12.2□□□□□ -0.46
HDDC2-202ENST00000398153 CHD3Q12873 2000 aaKnown RBP12.2□□□□□ -0.46
HDDC2-202ENST00000398153 F5H5K5 113 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 M0R135 149 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 LY6HO94772 140 aa12.19□□□□□ -0.46
HDDC2-202ENST00000398153 HEXAP06865 529 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms