RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PPCDCQ96CD2 204 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 SCRN2Q96FV2 425 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 INSM2Q96T92 566 aaPredicted RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ERVK13-1Q9NX77 482 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF391Q9UJN7 358 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 FANCMQ8IYD8 2048 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 G3V3Y1 287 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 BLOC1S5-TXNDC5H3BN57 136 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC2A5P22732 501 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 TNFSF8P32971 234 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 MNDAP41218 407 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 LGALS7P47929 136 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 CRISP1P54107 249 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 UCNP55089 124 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ERVFRD-1P60508 538 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 CKS1BP61024 79 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 SRSF1Q07955 248 aaKnown RBP eCLIP5.94□□□□□ -1.464e-11■■□□□ 13.4
TM9SF4-202ENST00000398022 RSPO2Q6UXX9 243 aaPredicted RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 SLC29A4Q7RTT9 530 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 TM4SF19Q96DZ7 209 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 OR2M2Q96R28 347 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 TNFRSF13CQ96RJ3 184 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF576Q9H609 170 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 UBE2ZQ9H832 354 aaPredicted RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 WDR76Q9H967 626 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 MSL2Q9HCI7 577 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 MARCH5Q9NX47 278 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF226Q9NYT6 803 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 RPL36Q9Y3U8 105 aaKnown RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 WNT6Q9Y6F9 365 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 CFAP47Q6ZTR5 3102 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 C17orf105B2RV13 164 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 NPIPB9F8W1W9 429 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 PIPP12273 146 aaPredicted RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 OMGP23515 440 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 CERS1P27544 350 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 OR1E2P47887 323 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 SMIM11AP58511 58 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 RPL32P62910 135 aaKnown RBP5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF763Q0D2J5 394 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 DNM1P34Q6PK57 102 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 DEFB128Q7Z7B8 93 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 RGMAQ96B86 450 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ARHGDIGQ99819 225 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 AMDHD2Q9Y303 409 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 MTCH2Q9Y6C9 303 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 ENPP4Q9Y6X5 453 aa5.94□□□□□ -1.46
TM9SF4-202ENST00000398022 TRAPPC2LH3BP13 241 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 LALBAP00709 142 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 C8AP07357 584 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 EPHA1P21709 976 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 IDSP22304 550 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 GKP32189 559 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 CD96P40200 585 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 PODNL1Q6PEZ8 512 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 AGTRAPQ6RW13 159 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 OR9Q2Q8NGE9 314 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 OCC1Q8TAD7 63 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 TMEM239Q8WW34 195 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 COQ8BQ96D53 544 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 HDAC8Q9BY41 377 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 HCN3Q9P1Z3 774 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 C2orf16Q68DN1 1984 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 ARRDC5A6NEK1 342 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 RGS11O94810 467 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 GLSO94925 669 aaPredicted RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SCG5P05408 212 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 CD2P06729 351 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 FGF7P21781 194 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 RBMS1P29558 406 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 FOXL2P58012 376 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 TAS2R38P59533 333 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 PFN3P60673 137 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 MRPS10P82664 201 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 NFATC4Q14934 902 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SPHARQ15513 63 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 ZNF284Q2VY69 593 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 OR52W1Q6IF63 320 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 FAM131AQ6UXB0 335 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 NRARPQ7Z6K4 114 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 TRIM48Q8IWZ4 208 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 WDR20Q8TBZ3 569 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 LINC01599Q8WXQ3 324 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 PINX1Q96BK5 328 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 WRAP53Q9BUR4 548 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 POLR2J2Q9GZM3 115 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 CHST5Q9GZS9 411 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 SIRPDQ9H106 197 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 UBTD1Q9HAC8 227 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 GAR1Q9NY12 217 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 RASL12Q9NYN1 266 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 CMAHPQ9Y471 501 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 IGLV3-16A0A075B6K0 115 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 A0A0G2JN53 185 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 C1orf226A1L170 272 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 PRSS37A4D1T9 235 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 E9PQ18 207 aa5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 PLRG1O43660 514 aaKnown RBP5.93□□□□□ -1.46
TM9SF4-202ENST00000398022 TYRP14679 529 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms