RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 FAM172BPA6NC97 362 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 LRRC30A6NM36 301 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 CD40LGP29965 261 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 LSM11P83369 360 aaKnown RBP eCLIP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 BCL2A1Q16548 175 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 SLC25A30Q5SVS4 291 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 OTPQ5XKR4 325 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 TMEM81Q6P7N7 255 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 RNF170Q96K19 258 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 HES7Q9BYE0 225 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 EXOGQ9Y2C4 368 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 LRP12Q9Y561 859 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ZFHX2Q9C0A1 2572 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 LOC100509620A0A075B734 347 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 IFNA21P01568 189 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF32P17041 273 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 VAMP1P23763 118 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 SELENOPP49908 381 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 AGFG1P52594 562 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 TMED4Q7Z7H5 227 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 TRAPPC6BQ86SZ2 158 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 REEP6Q96HR9 211 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 BOD1Q96IK1 185 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF416Q9BWM5 594 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ADGRL4Q9HBW9 690 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 POLE4Q9NR33 117 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 MEMO1Q9Y316 297 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 OR7C1O76099 320 aaPredicted RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 AQP8O94778 261 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 FAM157BP0CG42 384 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ANXA3P12429 323 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 MPGP29372 298 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 DDOSTP39656 456 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 RBP2P50120 134 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 PSMA6P60900 246 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 LSAMPQ13449 338 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 OR8G1Q15617 311 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 THOC7Q6I9Y2 204 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 PSMF1Q92530 271 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 PIGTQ969N2 578 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 GPA33Q99795 319 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 USB1Q9BQ65 265 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ZCCHC4Q9H5U6 513 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 PAIP2BQ9ULR5 123 aaKnown RBP7.37□□□□□ -1.23
PTPRD-204ENST00000397606 SLC22A13Q9Y226 551 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ETV7Q9Y603 341 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 PLXNA2O75051 1894 aa7.37□□□□□ -1.23
PTPRD-204ENST00000397606 ANKRD61A6NGH8 418 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RER1O15258 196 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 LYZL6O75951 148 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 BPNT1O95861 308 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 CPT2P23786 658 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 LIMS1P48059 325 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 TNFSF10P50591 281 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 GP2P55259 537 aaKnown RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 NHLH1Q02575 133 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 TCF15Q12870 199 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 DOC2BQ14184 412 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 GLYATL3Q5SZD4 288 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF770Q6IQ21 691 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 AKAP14Q86UN6 197 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 FAM71CQ8NEG0 241 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OR1M1Q8NGA1 313 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OR5D18Q8NGL1 313 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OR5H2Q8NGV7 314 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OPALINQ96PE5 141 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RHNO1Q9BSD3 238 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ISG20L2Q9H9L3 353 aaKnown RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 STEAP1Q9UHE8 339 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 KCNIP3Q9Y2W7 256 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 SCN2AQ99250 2005 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 CEP250Q9BV73 2442 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 TSC22D2O75157 780 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 TGM4P49221 684 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 EIF2B2P49770 351 aaKnown RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RBM39Q14498 530 aaKnown RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 PABPC1L2AQ5JQF8 200 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 UBE2NLQ5JXB2 153 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 C1orf185Q5T7R7 199 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 FBXW9Q5XUX1 488 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ASB5Q8WWX0 329 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 SIGLEC12Q96PQ1 595 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 KLK13Q9UKR3 277 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 POLDIP2Q9Y2S7 368 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 FAM90A27PA6NNH2 459 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 HLA-HP01893 362 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 KLRB1Q12918 225 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ZNF239Q16600 458 aaKnown RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RGS7BPQ6MZT1 257 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 ANKRD16Q6P6B7 361 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 TMEM108Q6UXF1 575 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 OR5AS1Q8N127 324 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 WDSUB1Q8N9V3 476 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RNF128Q8TEB7 428 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 GPX7Q96SL4 187 aaPredicted RBP7.36□□□□□ -1.23
PTPRD-204ENST00000397606 WFDC6Q9BQY6 131 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 RNF32Q9H0A6 362 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 KCNJ16Q9NPI9 418 aa7.36□□□□□ -1.23
PTPRD-204ENST00000397606 HPGDSO60760 199 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms